| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4875 |
|---|
| Symbol | |
|---|
| ID | 8336229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5547099 |
|---|
| End bp | 5548550 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644957974 |
|---|
| Product | Alpha-L-fucosidase |
|---|
| Protein accession | YP_003115576 |
|---|
| Protein GI | 256394012 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3669] Alpha-L-fucosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.185578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.768755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTCT TCACGCCGAC TTGGGCCTCC GTCGACCGAC ACGTCGCAGC ACCGGAATGG
TTCCAAGACG CCAAGTTCGG GATCTACCAC CACTGGGGCG CCTTCAGCGT CCCGGCGTTC
GCCAACGAGT GGTATCCACG CGCGATGTAC TATCCCGACG GCGCGGAGCG GCAACACCAC
GTCGAGACCT ACGGCGATCC CCAGACGTGG CCGTACCACC GCTTCATCGA AGGCGCCGAC
GACAGGTCCG GCCGGTTCGT CAAGTTCGCG CCGACGCTCG CCTCGGCCGG CGGGCGTTTC
GACCCGCACG AGTGGGCTCA GCTGATCGCC GACGCCGGCG CGCGCTTCGC CGGACCGGTC
GCCGAGCACC ACGACGGTTT CTCGATGTGG GACAGCCGCG TCAACGAGTG GAACTCGGTG
GCCAAGGGAC CGCAATTGGA CCTGCTGTCC CTGTTCGCCG AGGCCTACCG GGAACAAGGG
CTGAAGCTGC TGGTGGCGAT GCATCACGCC TACCACTACA CGGGCTACTT CGAGCATGTG
CCGCCGCAGC CCACGCGGTC CCTGCGCAAG CTCTACGGGC AACTGAGCAA ACCGGAACAC
GACCGGCTGT GGCTGGACAA ACTCAAGGAA GTCATCGATC TGGCCCGGCC GGACATCATC
TACCAGGACG TCAACCTCGA CAAGATCGAG GAGCCGATCG TCCTGGAATT CCTGGCCCAC
TACTACAACC GCGCCGGCGA GTGGGGCACC GAGGTCGTGG CCACCTACAA GGACGGCCTC
ACCGACAAGG GCCAGGTCTA CGACTACGAA CGCGGCGGTC CGAAGGACCT GACCCATCCG
TACTGGCTGA CCGATGACAT CCTCACCGTC GACAGCTGGT CCTACAAACC CGATCTCGTG
TATGTGCCGG TCGAGCTGAT CCTGCATTCG CTGATCGACA GGGTGAGCAA GAACGGCGGT
CTCCTGCTCA ACATCGCCCC CACCGCCGAG GGAGTCATCC CCGACGAGCA GCGCACCCTC
CTGCTCGCCA TCGGCGACTA CCTGCGTCGC TACGGCGAGT CGGTCTACGA GACCCGGGCA
TGGACCGTCT ACGGCGAGGG ACCGACGGAG ATGGGCGGCG GATCCTTCGT CCCGCCAGTG
GCCGGTACCG CCAGGGACAT CCGCTTCACG CGCGACAAGC CGGGCCGCAT CCTGTACGCG
ACCGTGCTCG GCTGGCCGGC GGGCGGTCTG ACGATCGCCA CGCTGGCAGC AGGACGCTTC
GACCTCGGCT CGCTGCGCGC GATCGAGCTG ATCGGACCCG AGACCGACGC GTACATCCCG
CTGAGCGACT ACCGCCAGGA CGCAGCCGGG CTGCACATCG CCCTCCCGCA GTCCGCGCCG
TTCAGCGCTG CCGCCTATGT CGCCAAGCTG ACCTTCGACG GACCGATACC GAGCCTTGAT
TCAAAACCCT GA
|
|---|
| Protein sequence | MTLFTPTWAS VDRHVAAPEW FQDAKFGIYH HWGAFSVPAF ANEWYPRAMY YPDGAERQHH
VETYGDPQTW PYHRFIEGAD DRSGRFVKFA PTLASAGGRF DPHEWAQLIA DAGARFAGPV
AEHHDGFSMW DSRVNEWNSV AKGPQLDLLS LFAEAYREQG LKLLVAMHHA YHYTGYFEHV
PPQPTRSLRK LYGQLSKPEH DRLWLDKLKE VIDLARPDII YQDVNLDKIE EPIVLEFLAH
YYNRAGEWGT EVVATYKDGL TDKGQVYDYE RGGPKDLTHP YWLTDDILTV DSWSYKPDLV
YVPVELILHS LIDRVSKNGG LLLNIAPTAE GVIPDEQRTL LLAIGDYLRR YGESVYETRA
WTVYGEGPTE MGGGSFVPPV AGTARDIRFT RDKPGRILYA TVLGWPAGGL TIATLAAGRF
DLGSLRAIEL IGPETDAYIP LSDYRQDAAG LHIALPQSAP FSAAAYVAKL TFDGPIPSLD
SKP
|
|---|
| |