Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4873 |
Symbol | |
ID | 8336227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5541936 |
End bp | 5543405 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957972 |
Product | Alpha-L-arabinofuranosidase B catalytic |
Protein accession | YP_003115574 |
Protein GI | 256394010 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.958979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.944256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA GCGCATGGAG CCGCCGAAAA CTCGGCAGCC TGGCGGCCGG GATCACGGTC GTGCTCGGCA CGATCGCCGG CACCGCGGCC ATGACCGGTG CGGCGCACGC CGCGTCGCAG GGCCCGTGTG ACATCTACGC GGCCGGCGGC ACGCCGTGCG TGGCCGCGCA CTCGACGACG CGTGCCTTGT CCGCCGCGTA CAACGGTCCG CTGTACCAAG TGCGGCGCTC CTCGGACAAC ACGACCACGA ACATCGGACT GCTCTCCGCG GGCGGCGTCG CCAACGCCGC GGCGCAGGAT TCGTTCTGCG CGGGTACATC CTGTGTGATC ACCGTGATCT ACGACCAGTC CGGGCGTGGC AACAACCTGA CTCCCGCGCC CGCGGGCGGG TACGTGCACA CCCCCGACAG CCCCGCGAAC GCCACCGCGG CGCCGATCAC CGTCGGCGGC CACAAGGCCT ACGGCGTGTT CACCTCCACG GGTATCGGCT ACCGCGACGA CACCACCAAC GGGGTGGCCA CCGGGGACAG CCCGGAGGGC GAGTACGACG TGGTGGACGG CACGCACTAC AACAACGGGT GCTGCTTCGA CTACGGCAAC GCCGAGACCA CCAACAACGA CGACGGCAAC GGCACCATGG AGGCGATCTA CTTCGGCAAC GCCTCCTATT GGGACACCGG CGCCGGCAAC GGCCCTTGGA TCATGGCCGA CCTGGAGAAC GGTCTGTTCT CCGGCTCCAA CGTGAACAGC CCCAATCCCG GCGATCCGAC GATCAACTAC CGGTTCACCA CCGCCATGAT CAAGGGCGGC GCGAACCAGT GGGCGATCCG CGGCGGCAAT GCGGCCTCGG GAGGCTTGTC CACCTTCTAC AGCGGGCCGC GTCCTCCCGG GTACAACCCG ATGCACAAAG AGGGCGCGAT TCTGCTGGGC ATCGGCGGTG ACAACAGCGA CGGCGCCGCC GGAACCTTCT ACGAAGGCGT GATGACGTCG GGGTATCCCT CCGACGCCAC CGAGGCCGCG GTGCAGGCGA ACATCAACGC CGCCGGATAC GCCGCCGGCA CCAGCGGGGG CACCGGCACC GGCGCATTGC ACGCCAACGG CGCCAGCAAG TGCCTGGACG ATCCGAACGG CAGCACCACC GGCGGAACCC AGCTCCAGAT CTATGGCTGC AACGGGCAGG CCAACCAGAC CTGGACGCGC ACCTCGTCGA ACCAGCTGAC CGTCACCAAC AGCGGGACGA CGGACTGCCT GGACGCGAAC GGCCAGGGCA CCAGCCCCGG CACGAAGGTA ATTATCTGGC CGTGCAGCGG ACAGAGCAAC CAGCAGTGGC AGTTCAACGC CAACGGCACC GTCACCGGCG TGCAATCAGG GCTCTGCCTC GACGTGACCG GCGCGTCCAC CGCGGACGGC GCGCTGGTCG AACTGTGGAC CTGCAACGGC GGCAGCAACC AACAGTGGAA TCTCGGATAG
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Protein sequence | MKASAWSRRK LGSLAAGITV VLGTIAGTAA MTGAAHAASQ GPCDIYAAGG TPCVAAHSTT RALSAAYNGP LYQVRRSSDN TTTNIGLLSA GGVANAAAQD SFCAGTSCVI TVIYDQSGRG NNLTPAPAGG YVHTPDSPAN ATAAPITVGG HKAYGVFTST GIGYRDDTTN GVATGDSPEG EYDVVDGTHY NNGCCFDYGN AETTNNDDGN GTMEAIYFGN ASYWDTGAGN GPWIMADLEN GLFSGSNVNS PNPGDPTINY RFTTAMIKGG ANQWAIRGGN AASGGLSTFY SGPRPPGYNP MHKEGAILLG IGGDNSDGAA GTFYEGVMTS GYPSDATEAA VQANINAAGY AAGTSGGTGT GALHANGASK CLDDPNGSTT GGTQLQIYGC NGQANQTWTR TSSNQLTVTN SGTTDCLDAN GQGTSPGTKV IIWPCSGQSN QQWQFNANGT VTGVQSGLCL DVTGASTADG ALVELWTCNG GSNQQWNLG
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