| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4872 |
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| Symbol | |
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| ID | 8336226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5540461 |
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| End bp | 5541930 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644957971 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115573 |
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| Protein GI | 256394009 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.111071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC ACAGACATCG ATGGCAGCGC ATCGCCGGCG CGGTCGGCTC GCTGACCCTG
CTCCTGGGCG CCTTGGTGGT AGCCCAGGCG TCGCACGCGG TTCCGGCCCG GGCCGCCACC
ATCAGCCAGT TCCATGGTGT GAACTGGGCG GATCCGAACG ACAATTTCAT CACCGGTCCC
AACATCCCGG TGGGCCTGTC GACCGCGGAC AATTACTCCA CCACCTACGC GAAGTCGACG
GCGATCCTGA AGGGTTTCCA AGGGCTCGGG GCCAACACCG TCCGGTTGGG GATGAACGCG
GCCACCACCT CCGGCAGTTG GTGGGGCAGC TACACCGCGA CGCTGGACGC CGCGACAGCG
CTGGGGATGA ACGTCATCAT CGCCCCGTGG CTGCAGGGCG GGACGGTTTC CGACACTAAC
TCCTTCTATC AGATGTGGGA CACGGTCATA GCGAAGTACG GCAGTAGCAG CAACGTCTAC
TTCGATGTCA TGAACGAGCC CTATGGGATG AACGCCACGC AGCTGACGAA CTTCGAGGCG
GGCTGGCTCG CGCGGTATCC CAGCGTTCCG CGCGGCCGGG TGATCCTTCC CGGCTTGTAC
TCCGACGGGA ACCTGTGCGC GGTGGGCGCC GACTCGCGGC TGTCCGGGAC CCTGCTGTCG
ATCCACATCT ACAGCATGTT CGGGGACTCG CACACCACCG AGGCGGCGTG GGTCAGCGAC
TTCCAGAACA ACCTGTGCGG GTACGCCAGC CGTGCCGTGC TCACCGAGTT CGGCGTCCCG
ATGACCACCG GCGTGAACTA CAACGGTCCC AAGGACGGCA CCAACAACGT CTCCTACCTG
TATGCGATCA CTGACACGGT GCGCAGCATG GGTATCGGCT CGGTGTTGTG GGTCGGCCTG
AAGGATCCGA GCCAGACCAC CGGTCCCGGT CCGTGTGACA ACGCCTCCTG CGGGATCACC
ACGTTGGGCG GCAGCGGCAC CAACCTCACG GTCAGCCTGA ACAACCAGTC CGGGCTGGAC
CGGCTGCAAT GGGGCTGGGG GACCGGCACG AATCCCGGCG GCGGTGGGGG AGGCGGTGGT
GGCACCGCCG GCGTGTTGCA CGCGGTCGCC GCCAACCGCT GCCTGGACGT GCCCAGCCAA
GCCACGGCCA ACGGCACACA GCTGCAGATC TGGGACTGCA ACGGAGGTAC CAACCAGCAG
TGGACGGCCC TGTCCAACGG CGAGTTGCAG GTCTACGGCG GCAAGTGCCT GGACGTCCCG
GGCCACGCGA CGACCGCGGG CACCCGCGTG GAGATCTGGG ACTGCAACGG TGGCGCCAAC
CAGCTGTGGA CCCTCAATTC CAACGGCACC GTGGTCGGCC GTGAATCAGG GCTCTGCCTG
GACGTGACCG GCGCGGGCAC CGCCAACGGC ACCGCGGTGG AGCTCTGGAC CTGCAGCGGA
CACAGCAACC AGCAGTGGTC CCGGCAGTAA
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| Protein sequence | MSTHRHRWQR IAGAVGSLTL LLGALVVAQA SHAVPARAAT ISQFHGVNWA DPNDNFITGP
NIPVGLSTAD NYSTTYAKST AILKGFQGLG ANTVRLGMNA ATTSGSWWGS YTATLDAATA
LGMNVIIAPW LQGGTVSDTN SFYQMWDTVI AKYGSSSNVY FDVMNEPYGM NATQLTNFEA
GWLARYPSVP RGRVILPGLY SDGNLCAVGA DSRLSGTLLS IHIYSMFGDS HTTEAAWVSD
FQNNLCGYAS RAVLTEFGVP MTTGVNYNGP KDGTNNVSYL YAITDTVRSM GIGSVLWVGL
KDPSQTTGPG PCDNASCGIT TLGGSGTNLT VSLNNQSGLD RLQWGWGTGT NPGGGGGGGG
GTAGVLHAVA ANRCLDVPSQ ATANGTQLQI WDCNGGTNQQ WTALSNGELQ VYGGKCLDVP
GHATTAGTRV EIWDCNGGAN QLWTLNSNGT VVGRESGLCL DVTGAGTANG TAVELWTCSG
HSNQQWSRQ
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