| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4852 |
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| Symbol | |
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| ID | 8336206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5519835 |
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| End bp | 5521157 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957952 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_003115554 |
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| Protein GI | 256393990 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00125514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCTT CGGAGATCCT TCATCTTTTA CGAGTGGCCA GGCCGCCGGC ACCCCACGGC
GCGTACCGCC TGGCCCGGTG CGCCACGATC GAGGACGTCG CCCGCGTCGC GCGCCGCCGC
CTGCCGCTGG GTGCGCGGGC CTACCTGGAG AACGGCGGCG AGGGTCAGCA CACGCTGCAC
CGCAACCGAG CCGCGTTCGG CTCCTACACG TTCCGCCCCC GGCAGCCCCG CGACGTCAGC
GGCGTGGACA CCGGCACCAC GGTGCTGGGA CAGCGGATTC CGCTGCCGTT CGCGCTGTCC
CCCGTCGGCG CGCCGCGCAT GTTCCATCAC GACGGCGAGC TGGCGGTCGC CAGAGCCGCT
CGGGACGCGG GCATCCCCTA CGGCATCTCA ACACTCGCCA ACACCTCGGT CGAGGACGTC
GCCGAACAGA CTGACAGCCC CCTGTGGTTC CAGCTGTACA TCTGGGGCGA CCGCAGCAAG
AGCAAGGAGG CTGTCGCGCG CGCCAAGGCT GCCGGGTATC AGGCTCTGCT GGTCAACATC
GACACCTCGG TGCGCTCCGA ACGGATCCCG GAGAAGCACT CCGGACTCGT TCTGCCCAGC
CCGCAGCTCC CCTTGAAGAC CCTCTTCGAG GGCGCGCTGC ATCCGGCGTG GGCCTGGAAC
TTCCTCACCT CGCCGACGGT CAGCTTCCCG AACATCGGCC CGCCGGACCA GCGGTCGCTG
GAGGTGATGT CGGACATGTT CGACGGGACG GTCTGCTGGG ACGACCTGGA CTGGATCCGC
CGGATATGGG ACGGGCCGAT CGTCCTGAAG GGCGTGACCA CCGTCGAGCA GGCACGGGAG
GCGGTCGACC ACGGACTGGA CGCGGTGATC GTCAGCAACC ACGGCGGCCG GCAGCTGGAC
CGTCTGCCCG CGACCATCGA CGTGCTGCCG GAGATCGCGG ACGCGGTCGG CGACCGGGTG
GAGGTGCTGG TCGACTCCGG ATTCCGCAGC GGCGGCGACA TCGCGACGGC GCTGGCCTTG
GGCGCCAAAG CCGTCCTGGT CGGCCGGGCC CACCTGTACG GCCTGGCCGC GGCCGGCGAG
GCCGGGGTGC GGCACTGCGT CGACATCCTC GCCCGCGAAC TCCGGATGAC GATGCAGTTG
AACGGCGCGA GGAATATCGC CGAACTCGAC CGCGGACTGA TCCACCGGCG CGGCTCGGCG
GATCCGGCTG CCTCGGCTGC CTCGGCGCTG GATTCGACAG CTTCAGCGGG CTCGACAGCT
TCGGGAGCCT CGGCGGATTC GCCGGATCCG GCAGCCTCCG AACGCTCTTC CGCGCATGCC
TGA
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| Protein sequence | MRPSEILHLL RVARPPAPHG AYRLARCATI EDVARVARRR LPLGARAYLE NGGEGQHTLH
RNRAAFGSYT FRPRQPRDVS GVDTGTTVLG QRIPLPFALS PVGAPRMFHH DGELAVARAA
RDAGIPYGIS TLANTSVEDV AEQTDSPLWF QLYIWGDRSK SKEAVARAKA AGYQALLVNI
DTSVRSERIP EKHSGLVLPS PQLPLKTLFE GALHPAWAWN FLTSPTVSFP NIGPPDQRSL
EVMSDMFDGT VCWDDLDWIR RIWDGPIVLK GVTTVEQARE AVDHGLDAVI VSNHGGRQLD
RLPATIDVLP EIADAVGDRV EVLVDSGFRS GGDIATALAL GAKAVLVGRA HLYGLAAAGE
AGVRHCVDIL ARELRMTMQL NGARNIAELD RGLIHRRGSA DPAASAASAL DSTASAGSTA
SGASADSPDP AASERSSAHA
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