Gene Caci_4836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4836 
Symbol 
ID8336190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5510698 
End bp5511702 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content73% 
IMG OID644957936 
Producthypothetical protein 
Protein accessionYP_003115538 
Protein GI256393974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.422259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC GGGCCGGCGC CGACCACGAG CCGCACCACC GGGTCGCCGC CGGGGCGCTG 
CTCACCGCCG GGATGGCGGC GGTCCTGGCG GTCGGCTTCC TCCGGTTGCA GCGGGACCAT
GCCGCCTTGC CGCCGGTCGC ACGCTACGCC CTGGAGGTGG CGCTGCCGCG GTGGAAGCTG
TCCGAGCCGG TCAACGAGGT CGTCTACGGC ACGCGGGGTT TCGACACGTT CGGGGAGACG
TTCCTGCTGC TGGCCGCCGT CATCAGCGTC ATCGTGATCT CCCGGCCGCG CGAGCCGCGC
CGCGGGTACT TCGGGGAGGA GACCGCCGGG CGCCGGGAAC AGGCGGAGGT GGACCCGCAC
GAGCGGCGCG ATCAAGAAGA AGAGCAGGCG CGCGCCGCGG AGAAGGAGGA GGCGGGCGAG
CCCGACGACG CGGTGGGCGG CGCGGCCGGG CTGCGCCGTC CCGAGACCCC TGACGCCGAG
CCCGTCGGCT CCCCGGCGCC GGAACGCGCC CACGCGATGA GCGTCGTGAT CCGCACCGCC
ATCCGTACCG CCGCTCCCGT GCTGGCGGTC ACCGGCCTCT ACTTGGTCGC TTGGGGATAC
TCGCCCGGCG GCGGGTTCCC GGGCGGCGCC GTCATGCTCG GGGTGGCGCT GCTGGTCTAC
GCCGGCTTCG GGCGCAAACG CATCGCCGGC GTGATCCGTC CCGGGCTGCT GGAAGGTATC
GAGATGGCAG GCGCCGCGCT GATCATCGGC GCCGAGACCC TCGGCCTGCT GCTCAAGGGC
TCGTTCTCGG CGAACTGGCT GCCGCTCGCG CCGGTCGGGA CGATCCGCTC CGGCGGTGTC
GCGCAGCTGT TCAGCGTCGG AGAGCTGATC GAGGTCGGTA CCGGCCTGAT GATCGCGGTC
TTCGCGGTGC TGGGCATGAC GCACGACTGG ACGCCGGACG AGGACGGCGA CAGCGACGGC
GAAGACAATC AGGGTCCTGA TCAGAGCGGA GGAAGCCGCC GATGA
 
Protein sequence
MSRRAGADHE PHHRVAAGAL LTAGMAAVLA VGFLRLQRDH AALPPVARYA LEVALPRWKL 
SEPVNEVVYG TRGFDTFGET FLLLAAVISV IVISRPREPR RGYFGEETAG RREQAEVDPH
ERRDQEEEQA RAAEKEEAGE PDDAVGGAAG LRRPETPDAE PVGSPAPERA HAMSVVIRTA
IRTAAPVLAV TGLYLVAWGY SPGGGFPGGA VMLGVALLVY AGFGRKRIAG VIRPGLLEGI
EMAGAALIIG AETLGLLLKG SFSANWLPLA PVGTIRSGGV AQLFSVGELI EVGTGLMIAV
FAVLGMTHDW TPDEDGDSDG EDNQGPDQSG GSRR