Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4836 |
Symbol | |
ID | 8336190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5510698 |
End bp | 5511702 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957936 |
Product | hypothetical protein |
Protein accession | YP_003115538 |
Protein GI | 256393974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.422259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC GGGCCGGCGC CGACCACGAG CCGCACCACC GGGTCGCCGC CGGGGCGCTG CTCACCGCCG GGATGGCGGC GGTCCTGGCG GTCGGCTTCC TCCGGTTGCA GCGGGACCAT GCCGCCTTGC CGCCGGTCGC ACGCTACGCC CTGGAGGTGG CGCTGCCGCG GTGGAAGCTG TCCGAGCCGG TCAACGAGGT CGTCTACGGC ACGCGGGGTT TCGACACGTT CGGGGAGACG TTCCTGCTGC TGGCCGCCGT CATCAGCGTC ATCGTGATCT CCCGGCCGCG CGAGCCGCGC CGCGGGTACT TCGGGGAGGA GACCGCCGGG CGCCGGGAAC AGGCGGAGGT GGACCCGCAC GAGCGGCGCG ATCAAGAAGA AGAGCAGGCG CGCGCCGCGG AGAAGGAGGA GGCGGGCGAG CCCGACGACG CGGTGGGCGG CGCGGCCGGG CTGCGCCGTC CCGAGACCCC TGACGCCGAG CCCGTCGGCT CCCCGGCGCC GGAACGCGCC CACGCGATGA GCGTCGTGAT CCGCACCGCC ATCCGTACCG CCGCTCCCGT GCTGGCGGTC ACCGGCCTCT ACTTGGTCGC TTGGGGATAC TCGCCCGGCG GCGGGTTCCC GGGCGGCGCC GTCATGCTCG GGGTGGCGCT GCTGGTCTAC GCCGGCTTCG GGCGCAAACG CATCGCCGGC GTGATCCGTC CCGGGCTGCT GGAAGGTATC GAGATGGCAG GCGCCGCGCT GATCATCGGC GCCGAGACCC TCGGCCTGCT GCTCAAGGGC TCGTTCTCGG CGAACTGGCT GCCGCTCGCG CCGGTCGGGA CGATCCGCTC CGGCGGTGTC GCGCAGCTGT TCAGCGTCGG AGAGCTGATC GAGGTCGGTA CCGGCCTGAT GATCGCGGTC TTCGCGGTGC TGGGCATGAC GCACGACTGG ACGCCGGACG AGGACGGCGA CAGCGACGGC GAAGACAATC AGGGTCCTGA TCAGAGCGGA GGAAGCCGCC GATGA
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Protein sequence | MSRRAGADHE PHHRVAAGAL LTAGMAAVLA VGFLRLQRDH AALPPVARYA LEVALPRWKL SEPVNEVVYG TRGFDTFGET FLLLAAVISV IVISRPREPR RGYFGEETAG RREQAEVDPH ERRDQEEEQA RAAEKEEAGE PDDAVGGAAG LRRPETPDAE PVGSPAPERA HAMSVVIRTA IRTAAPVLAV TGLYLVAWGY SPGGGFPGGA VMLGVALLVY AGFGRKRIAG VIRPGLLEGI EMAGAALIIG AETLGLLLKG SFSANWLPLA PVGTIRSGGV AQLFSVGELI EVGTGLMIAV FAVLGMTHDW TPDEDGDSDG EDNQGPDQSG GSRR
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