| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4828 |
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| Symbol | |
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| ID | 8336182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5502327 |
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| End bp | 5503166 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957928 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003115530 |
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| Protein GI | 256393966 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTCC TGGACGGCAA GGTCGCGATC GTCACCGGCT CGGCCCGCGG CATCGGCCGC
GCCACCGCCG ACCTGCTGGC CGCGCAGGGT GCCAGCGTCC TGATCAACGA CCTGGACGGC
GACGTCGCCG CCGAAACCGC CGCCGAGATC GCCAAGACCC ACGGCACCGA CACCGCCGTC
TTCGCCGGCG ACCTCACCGC CGAGGGCACC CCCGAAGCCC TGGTGGCCAA GGCCGCCGAC
ACCTTCGGCA AGATCGACAT CCTGGTCAAC AACGCCGGCT ACACCCTCGA CAAGCCGATC
CACACCATGA CCGACGACTG GTTCCAGCGC ATGCTCGACA TCCACACGGT CGTCCCCTTC
CGCACCATCC GAGCAGCCGC CCCCTACTTC CGCGACCCGG CGAAAAAGGA ACGCGAACAG
GGCATCGAGG TCTTCCGCAA GATCGTGAAC GTCTCCTCCG TCAGCGGCAC CATGGGCAAC
GCCGGCCAAG CGAACTACTC CGCGGCCAAG TCAGCGGTAG TCGGCCTGAC CAAAACCCTC
GCCAAGGAAT GGGGCCAGTT CAAGGTCAAC GTCAACGCCG TGGCCTTCGG CCACATAGAA
ACCCGCCTCA CCGCCGCCAA GAGCGAAGAC AACACCATGA CCATCGGCGG CGAGACAGTC
CACCTCGGCA TCCCCGAAGC CATGGTCGGC GCCACCAGCT TCCTGATCCC CCTCGGCCGT
CCCGGCACCC CCGAAGAAGC CGCGGGCGGC GTCTTCTACC TGTGCTCCCC CTGGTCCAAC
TACGTGTCGG GCCAGGTGCT GAACGTCACC GGCGGGCAAT GGATCGGGAT GATGTCCTGA
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| Protein sequence | MGVLDGKVAI VTGSARGIGR ATADLLAAQG ASVLINDLDG DVAAETAAEI AKTHGTDTAV
FAGDLTAEGT PEALVAKAAD TFGKIDILVN NAGYTLDKPI HTMTDDWFQR MLDIHTVVPF
RTIRAAAPYF RDPAKKEREQ GIEVFRKIVN VSSVSGTMGN AGQANYSAAK SAVVGLTKTL
AKEWGQFKVN VNAVAFGHIE TRLTAAKSED NTMTIGGETV HLGIPEAMVG ATSFLIPLGR
PGTPEEAAGG VFYLCSPWSN YVSGQVLNVT GGQWIGMMS
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