Gene Caci_4827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4827 
Symbol 
ID8336181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5501398 
End bp5502237 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content74% 
IMG OID644957927 
ProductMaoC domain protein dehydratase 
Protein accessionYP_003115529 
Protein GI256393965 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA ACCTGGAGGC GCTCGGCGTC TGGACCGAGC CGAAGCACTT CACCGTCGAG 
CGGGAGCGGG TCGCCGCCTA CGCCGCGGCG ACCAACGACC CGATCGCCGA GCACCGCTCC
GGAGAGCTGG CGCCGCCGGT CTTCGCGGTG GTCCCGGCCT TCGAGTCCAG CGCGGAGGCG
GTCCTGGCGG TCGCGCCGCC GGAGCTGCTG ATGATGCTGG TCCACGGCGA GCAGGACTTC
TTCTACCACC GCCCGATCAC CCCCGGCCTG GAGCTGGTCA CGCGCTCGGC GCCGCTGGGG
GTCCGGCAGA CGTCGGCCGG CGTGGTGCTC GCGGTGAAGT CCGAGACCCG CACCCCCGAC
GGCGCGCTCG TCAACGAGCA GTGGATGTCC ACCTTCTTCC GCGGCGCGCA GGACGAGCCC
GGCGGCGGCG AGCAGGCGCC GGGCCACGCG CTGGCGCAGG AGGTGCGCGC CACCGAACCG
GTCGGCGAGG CCAAGCAGCA CGTGGACGCC GACCAGACGG TCCGCTACGC CGAGCCCTCC
GGCGACCACA ACCCGATCCA TCTGGACCCT GACTTCGCCC GCGCGGTCGG CCTGCCCGGC
ATCATCAACC ACGGGCTGTG CACGATGGCG TTCGCCTCGC ACGCCGTGCT CGGCATCGCC
GAAACCGACC CTCGCGCCCT GGAGCGGCTG GCCGTACGCT TCGCCAAACC GGTGCTGCCC
GGCCAGGACA TCAGCACCCG GGCCTGGGCC GCGGGCGCGG GCGCGGTCGC GTTCGAGACC
ACCTCGGACG CCGGCGTCGT GGTCGTCAAG GACGGCCTGG CACGCTTCCG CCGGCCCTGA
 
Protein sequence
MSFNLEALGV WTEPKHFTVE RERVAAYAAA TNDPIAEHRS GELAPPVFAV VPAFESSAEA 
VLAVAPPELL MMLVHGEQDF FYHRPITPGL ELVTRSAPLG VRQTSAGVVL AVKSETRTPD
GALVNEQWMS TFFRGAQDEP GGGEQAPGHA LAQEVRATEP VGEAKQHVDA DQTVRYAEPS
GDHNPIHLDP DFARAVGLPG IINHGLCTMA FASHAVLGIA ETDPRALERL AVRFAKPVLP
GQDISTRAWA AGAGAVAFET TSDAGVVVVK DGLARFRRP