Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4803 |
Symbol | |
ID | 8336157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5471754 |
End bp | 5474684 |
Gene Length | 2931 bp |
Protein Length | 976 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644957903 |
Product | FAD linked oxidase domain protein |
Protein accession | YP_003115505 |
Protein GI | 256393941 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGACC GATCTTCCCT TGCGAAGTCC TCCGCGCCCG GCCCGAACCA TGCCTCTGAC CTGCCCGATC GGGCGTGGCG CGCGGCGTTG GCCGAGGCCG GGCTGGACGT CGGCTCCGGC GCCCGGCGGC GCGCCGAGTA CAGCGCCGAC GCCTCCAACT ACCGGCACGT GCCGCGCGGC GTGGCCTTCC CGCGCGACGC CGAGCAGGTC GCCGCGGCGG TGCGCGTCAG CCGGGCGCAC GGTGTGCCGG TGACGCTGCG CGGCGGCGGC ACCTCGGTCG CCGGGAACGC CATCGGCGAA GGACTGGTGC TGGACTGTTC GCGGTACTTC GGGCGGGTCC TGGAGCTGGA CGCCGAGGCC CGGACCGCGC GGGTGGAGCC GGGCGTCGTG CTCGACGCGC TCCAAGCGGC AGCGGCTCCG CACGGACTGC GCTTCGGGCC CGACCCCTCC ACCGCCTCCC GCTGCACCGT CGGCGGCATG ATCGGCAACA ACGCCTGCGG CGCGCGCTCG CTGGCGTTCG GGACCACGTC GGAGAACGTG CTGAGCCTGG ACCTGCTGCT CGCGGACGGC ACGCGGACCA CAGCGCGGCG CGGCACGTCC GGCGTCGCAG CGCTCGACGA GCGGCTGCGC GCCCTGGTCG AACGCCATGG CGAGGCCATC CGCCGGGAGC TCGGGCGCTT CCCGCGCCAG GTCTCCGGCT ACGCGTTGCA GCATCTGCTG CCGGAGAACG GGTTCGACGT CGCCAAGGCG CTCGTCGGCT CCGAGGGCAC GCTCGCCGCG GTGCTCGGCG CCGAGGTGCG GCTGGTGCCG GTGCTGCGGG ACCGGGTGCT GGTGGTCGCT GCGTACCCGG ACATGGTGAC GGCCGCCGCC GACGTGCCGC GCGTGCTGCC GCATCAGCCC TCGGCGATCG AAGGGCTGGG CTCGGAGCTG GCCGACGTGT GGGCGGCACG CCGCAAGCGT CCGCTGCCCT CCTCGCTGCC GGCCGGCGGC GGATGGCTGT TCATCGAGAC GACCGCGCGG CAGGCGGCGG CGATCGTCGC GGACCTGGCC GGCGCGCACG CGACCCGGGT GGTCCGCGCC GAGGCCGAGC AGCGCCAGCT GTGGCGGATC CGAGAGGACG GCGCCGGGCT GGCGACCCGG ACGGCCGAGG GCGCCGAGGC GTGGCCGGGC TTCGAGGACG CGGCGGTACC GCCGGAGCGG CTGGCGGACT ACCTGCGCGG GTTCGAGGCG CTCATGCTGA GCGCCGGCCG CAAGGGCACG GTGTTCGGGC ACTTCGGTGA GGGCTGCCTG CACGTCCGCA TCGACCACGA CCTGCAGACC GTCTCCGGAC GCCAGCAGTT CGCGGAGTTC ACCGCCGCCG CGACCGAACT GGTGGTCACG CACGGCGGAT CGGTGTCCGG CGAGCACGGC GACGGCCAGG CACGCTCGGC GCTGCTGGCC GCTATGTACA GCCCTGAGCT ACTGCGGGCG TTCGAGGAAT GCAAGACCGC GTTCGACCCC GACGGCGTGC TGAACCCCGC GATCCTGGTC GCGCCCCGCG ACTTCGCCGC CGACCTGCGC GCGCCGCACG TCGTGCAGAT GGCGCCGCCG GAGCTGGCAC TGGCGAGCGA CGGCGGGGAC TTCGGGCGCG CGGTGCGGCG CTGCGTGGGA GTGGGGAAGT GCCGCAGTGC GGTCGGCGGC GTGATGTGCC CGTCGTTCCG GGCCACTGGC GATGAGAAGG ACTCCACGCG CGGGCGTGCC AGGGTGCTGC AAGAGATGCT CGACGGACGC ACGGTCAGCG ACGGCTACCG CGCACCGGAG GTCCTGGACG CGCTCGACCT GTGCCTGGGC TGCAAGGGCT GCAAGACGGA CTGCCCGGTC GGCGTGGACA TGGCCTCGTA CAAGACAGAG GTGCTGGCGC AGCACTATCG CGGACGCGTG CGCCCGGCGG CGCACTACTC GCTGGGATGG CTGCCGGTGT GGGCGCGGCT GGCCGGGTTC GCGCCGCGCG TGGTGAACCG GGTGTTGGCC TCGCCGTTGG CGCCGCTGCT GAAGCGGCTC GGGGGGATCG CCGAGGAGCG GGCGCTGCCG CGGTTCGCGG TGCGATCCTT CTCGCGGCGG CGAGCAGATA GTGCCAGGAC ACAGCCGGGC GTCCCGACGA AGGACGCTGA AGCAGGAAGC TGGTCCACTT CCGCCCTGTG GGAGCTGGCG GGCACGCGCA CCGTTGTCCT GTGGGCCGAC ACCTTCACCG AGAACTTCAC GCCGGCTGTC GGCGACGCGC TGATCGCCGT CCTGCGCGCT GCGGGCTTCC GTGTCCTGCT GCCGCCGCGC ACCGGATGCT GCGGGCTCAC CTGGATCTCG ACCGGACAGC TCGGTACCGC GCGGCGCGTC GTCGCCCGCA CGCTGGAGGC GATGGCTCCG GCGGTCGAGG CGGGACTGCC GATCATCGTG CCCGAACCCA GCTGCGCCGC CGCCCTGCGC GAGGAGCTGA CTGAACTGCT GCCCACGCAT CCGCTCGCGG CACGCGCCGC AGAGCTGGTG ACCGGGCCCG CGCAGTTCCT GGCCCGGTAC GCGCCCGACT GGCGTCCGCC GGCCTCGCCG TGGAGCGGTC ACAAGGCCCT GATCCAGATC CACTGCCACC AGTACGCCAC CGGCGCCACC GGCGAGGCGG AGGTGGAGTT GCTGGCGCGC GCCGGGGTGG ACGCGCGCAT CGTGTCCGGA TGCTGCGGGT TGGCCGGCGA CTTCGGGGTC ACCGCCGGGC ACTACGAGGT CTCGATGGCC GTCGCGGAGC TGAACCTGCT CCCGGCCATC CGCGCCGCGT CCGCGGACAC GTTGCTCATC GCTGACGGAT TCAGCTGTCG GACCCAGGTG GAGCAGGCTG TGGCCGAGCG CCGGGTCTGG CATGTCGCCG AGGTGCTGGC GGCCGGTCTG CCGACACTCG ATGATGTTTG A
|
Protein sequence | MPDRSSLAKS SAPGPNHASD LPDRAWRAAL AEAGLDVGSG ARRRAEYSAD ASNYRHVPRG VAFPRDAEQV AAAVRVSRAH GVPVTLRGGG TSVAGNAIGE GLVLDCSRYF GRVLELDAEA RTARVEPGVV LDALQAAAAP HGLRFGPDPS TASRCTVGGM IGNNACGARS LAFGTTSENV LSLDLLLADG TRTTARRGTS GVAALDERLR ALVERHGEAI RRELGRFPRQ VSGYALQHLL PENGFDVAKA LVGSEGTLAA VLGAEVRLVP VLRDRVLVVA AYPDMVTAAA DVPRVLPHQP SAIEGLGSEL ADVWAARRKR PLPSSLPAGG GWLFIETTAR QAAAIVADLA GAHATRVVRA EAEQRQLWRI REDGAGLATR TAEGAEAWPG FEDAAVPPER LADYLRGFEA LMLSAGRKGT VFGHFGEGCL HVRIDHDLQT VSGRQQFAEF TAAATELVVT HGGSVSGEHG DGQARSALLA AMYSPELLRA FEECKTAFDP DGVLNPAILV APRDFAADLR APHVVQMAPP ELALASDGGD FGRAVRRCVG VGKCRSAVGG VMCPSFRATG DEKDSTRGRA RVLQEMLDGR TVSDGYRAPE VLDALDLCLG CKGCKTDCPV GVDMASYKTE VLAQHYRGRV RPAAHYSLGW LPVWARLAGF APRVVNRVLA SPLAPLLKRL GGIAEERALP RFAVRSFSRR RADSARTQPG VPTKDAEAGS WSTSALWELA GTRTVVLWAD TFTENFTPAV GDALIAVLRA AGFRVLLPPR TGCCGLTWIS TGQLGTARRV VARTLEAMAP AVEAGLPIIV PEPSCAAALR EELTELLPTH PLAARAAELV TGPAQFLARY APDWRPPASP WSGHKALIQI HCHQYATGAT GEAEVELLAR AGVDARIVSG CCGLAGDFGV TAGHYEVSMA VAELNLLPAI RAASADTLLI ADGFSCRTQV EQAVAERRVW HVAEVLAAGL PTLDDV
|
| |