Gene Caci_4803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4803 
Symbol 
ID8336157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5471754 
End bp5474684 
Gene Length2931 bp 
Protein Length976 aa 
Translation table11 
GC content74% 
IMG OID644957903 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003115505 
Protein GI256393941 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACC GATCTTCCCT TGCGAAGTCC TCCGCGCCCG GCCCGAACCA TGCCTCTGAC 
CTGCCCGATC GGGCGTGGCG CGCGGCGTTG GCCGAGGCCG GGCTGGACGT CGGCTCCGGC
GCCCGGCGGC GCGCCGAGTA CAGCGCCGAC GCCTCCAACT ACCGGCACGT GCCGCGCGGC
GTGGCCTTCC CGCGCGACGC CGAGCAGGTC GCCGCGGCGG TGCGCGTCAG CCGGGCGCAC
GGTGTGCCGG TGACGCTGCG CGGCGGCGGC ACCTCGGTCG CCGGGAACGC CATCGGCGAA
GGACTGGTGC TGGACTGTTC GCGGTACTTC GGGCGGGTCC TGGAGCTGGA CGCCGAGGCC
CGGACCGCGC GGGTGGAGCC GGGCGTCGTG CTCGACGCGC TCCAAGCGGC AGCGGCTCCG
CACGGACTGC GCTTCGGGCC CGACCCCTCC ACCGCCTCCC GCTGCACCGT CGGCGGCATG
ATCGGCAACA ACGCCTGCGG CGCGCGCTCG CTGGCGTTCG GGACCACGTC GGAGAACGTG
CTGAGCCTGG ACCTGCTGCT CGCGGACGGC ACGCGGACCA CAGCGCGGCG CGGCACGTCC
GGCGTCGCAG CGCTCGACGA GCGGCTGCGC GCCCTGGTCG AACGCCATGG CGAGGCCATC
CGCCGGGAGC TCGGGCGCTT CCCGCGCCAG GTCTCCGGCT ACGCGTTGCA GCATCTGCTG
CCGGAGAACG GGTTCGACGT CGCCAAGGCG CTCGTCGGCT CCGAGGGCAC GCTCGCCGCG
GTGCTCGGCG CCGAGGTGCG GCTGGTGCCG GTGCTGCGGG ACCGGGTGCT GGTGGTCGCT
GCGTACCCGG ACATGGTGAC GGCCGCCGCC GACGTGCCGC GCGTGCTGCC GCATCAGCCC
TCGGCGATCG AAGGGCTGGG CTCGGAGCTG GCCGACGTGT GGGCGGCACG CCGCAAGCGT
CCGCTGCCCT CCTCGCTGCC GGCCGGCGGC GGATGGCTGT TCATCGAGAC GACCGCGCGG
CAGGCGGCGG CGATCGTCGC GGACCTGGCC GGCGCGCACG CGACCCGGGT GGTCCGCGCC
GAGGCCGAGC AGCGCCAGCT GTGGCGGATC CGAGAGGACG GCGCCGGGCT GGCGACCCGG
ACGGCCGAGG GCGCCGAGGC GTGGCCGGGC TTCGAGGACG CGGCGGTACC GCCGGAGCGG
CTGGCGGACT ACCTGCGCGG GTTCGAGGCG CTCATGCTGA GCGCCGGCCG CAAGGGCACG
GTGTTCGGGC ACTTCGGTGA GGGCTGCCTG CACGTCCGCA TCGACCACGA CCTGCAGACC
GTCTCCGGAC GCCAGCAGTT CGCGGAGTTC ACCGCCGCCG CGACCGAACT GGTGGTCACG
CACGGCGGAT CGGTGTCCGG CGAGCACGGC GACGGCCAGG CACGCTCGGC GCTGCTGGCC
GCTATGTACA GCCCTGAGCT ACTGCGGGCG TTCGAGGAAT GCAAGACCGC GTTCGACCCC
GACGGCGTGC TGAACCCCGC GATCCTGGTC GCGCCCCGCG ACTTCGCCGC CGACCTGCGC
GCGCCGCACG TCGTGCAGAT GGCGCCGCCG GAGCTGGCAC TGGCGAGCGA CGGCGGGGAC
TTCGGGCGCG CGGTGCGGCG CTGCGTGGGA GTGGGGAAGT GCCGCAGTGC GGTCGGCGGC
GTGATGTGCC CGTCGTTCCG GGCCACTGGC GATGAGAAGG ACTCCACGCG CGGGCGTGCC
AGGGTGCTGC AAGAGATGCT CGACGGACGC ACGGTCAGCG ACGGCTACCG CGCACCGGAG
GTCCTGGACG CGCTCGACCT GTGCCTGGGC TGCAAGGGCT GCAAGACGGA CTGCCCGGTC
GGCGTGGACA TGGCCTCGTA CAAGACAGAG GTGCTGGCGC AGCACTATCG CGGACGCGTG
CGCCCGGCGG CGCACTACTC GCTGGGATGG CTGCCGGTGT GGGCGCGGCT GGCCGGGTTC
GCGCCGCGCG TGGTGAACCG GGTGTTGGCC TCGCCGTTGG CGCCGCTGCT GAAGCGGCTC
GGGGGGATCG CCGAGGAGCG GGCGCTGCCG CGGTTCGCGG TGCGATCCTT CTCGCGGCGG
CGAGCAGATA GTGCCAGGAC ACAGCCGGGC GTCCCGACGA AGGACGCTGA AGCAGGAAGC
TGGTCCACTT CCGCCCTGTG GGAGCTGGCG GGCACGCGCA CCGTTGTCCT GTGGGCCGAC
ACCTTCACCG AGAACTTCAC GCCGGCTGTC GGCGACGCGC TGATCGCCGT CCTGCGCGCT
GCGGGCTTCC GTGTCCTGCT GCCGCCGCGC ACCGGATGCT GCGGGCTCAC CTGGATCTCG
ACCGGACAGC TCGGTACCGC GCGGCGCGTC GTCGCCCGCA CGCTGGAGGC GATGGCTCCG
GCGGTCGAGG CGGGACTGCC GATCATCGTG CCCGAACCCA GCTGCGCCGC CGCCCTGCGC
GAGGAGCTGA CTGAACTGCT GCCCACGCAT CCGCTCGCGG CACGCGCCGC AGAGCTGGTG
ACCGGGCCCG CGCAGTTCCT GGCCCGGTAC GCGCCCGACT GGCGTCCGCC GGCCTCGCCG
TGGAGCGGTC ACAAGGCCCT GATCCAGATC CACTGCCACC AGTACGCCAC CGGCGCCACC
GGCGAGGCGG AGGTGGAGTT GCTGGCGCGC GCCGGGGTGG ACGCGCGCAT CGTGTCCGGA
TGCTGCGGGT TGGCCGGCGA CTTCGGGGTC ACCGCCGGGC ACTACGAGGT CTCGATGGCC
GTCGCGGAGC TGAACCTGCT CCCGGCCATC CGCGCCGCGT CCGCGGACAC GTTGCTCATC
GCTGACGGAT TCAGCTGTCG GACCCAGGTG GAGCAGGCTG TGGCCGAGCG CCGGGTCTGG
CATGTCGCCG AGGTGCTGGC GGCCGGTCTG CCGACACTCG ATGATGTTTG A
 
Protein sequence
MPDRSSLAKS SAPGPNHASD LPDRAWRAAL AEAGLDVGSG ARRRAEYSAD ASNYRHVPRG 
VAFPRDAEQV AAAVRVSRAH GVPVTLRGGG TSVAGNAIGE GLVLDCSRYF GRVLELDAEA
RTARVEPGVV LDALQAAAAP HGLRFGPDPS TASRCTVGGM IGNNACGARS LAFGTTSENV
LSLDLLLADG TRTTARRGTS GVAALDERLR ALVERHGEAI RRELGRFPRQ VSGYALQHLL
PENGFDVAKA LVGSEGTLAA VLGAEVRLVP VLRDRVLVVA AYPDMVTAAA DVPRVLPHQP
SAIEGLGSEL ADVWAARRKR PLPSSLPAGG GWLFIETTAR QAAAIVADLA GAHATRVVRA
EAEQRQLWRI REDGAGLATR TAEGAEAWPG FEDAAVPPER LADYLRGFEA LMLSAGRKGT
VFGHFGEGCL HVRIDHDLQT VSGRQQFAEF TAAATELVVT HGGSVSGEHG DGQARSALLA
AMYSPELLRA FEECKTAFDP DGVLNPAILV APRDFAADLR APHVVQMAPP ELALASDGGD
FGRAVRRCVG VGKCRSAVGG VMCPSFRATG DEKDSTRGRA RVLQEMLDGR TVSDGYRAPE
VLDALDLCLG CKGCKTDCPV GVDMASYKTE VLAQHYRGRV RPAAHYSLGW LPVWARLAGF
APRVVNRVLA SPLAPLLKRL GGIAEERALP RFAVRSFSRR RADSARTQPG VPTKDAEAGS
WSTSALWELA GTRTVVLWAD TFTENFTPAV GDALIAVLRA AGFRVLLPPR TGCCGLTWIS
TGQLGTARRV VARTLEAMAP AVEAGLPIIV PEPSCAAALR EELTELLPTH PLAARAAELV
TGPAQFLARY APDWRPPASP WSGHKALIQI HCHQYATGAT GEAEVELLAR AGVDARIVSG
CCGLAGDFGV TAGHYEVSMA VAELNLLPAI RAASADTLLI ADGFSCRTQV EQAVAERRVW
HVAEVLAAGL PTLDDV