| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4797 |
|---|
| Symbol | |
|---|
| ID | 8336151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5464004 |
|---|
| End bp | 5466001 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644957897 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_003115499 |
|---|
| Protein GI | 256393935 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.945849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGCAG TGAGCGAATC CGAGACAGAC CCGCGCCGCT ACGCGCACGC CGCGTCCGTC
GAGGCGGGCC GCTTCGAGAT CCCGGCGGTC GCGGGCGACT GGGACACCGG GATGCTGCGG
GCCATCACCG ATCCGCACCC GGACCTGCTC GCCCAGCTGA TGCCGCTGCG ACGCGGACCG
GTGCAGGGTC CGGCGGTGGA AGACCTGTGG TGGCCGACCG CCGCGACTCC GGAGACTTCC
GCGACCGCGA CCGCGACCGC GACCGCCGCC GCCCCCGCCC CCGCCCCCGC CACCGCGACC
GCCGCCTCCG CCACCGCCGC CCCGGCTGTC CCGCCCGCGA AGAAGACCTC CGCCGGCGCG
CGCTCCTCGG CGGGCATGGC CGCCGCGACC GTCGTCTCGC GGCTCGGCGG CATGGTCGCC
CAGCTTCTGC AGGCGGCGGC GCTCGGATCC TCGGTGCTGG CGACCACCTT CACCGTCGGC
AACACCCTGC CGAACATGAT CTACTTCCTG ATCATCGGCG GCGCGCTGAA CGCGGTCTTC
ATGCCGCAGC TGGTCGCGGC CATGCGGCGG GACGCCGACG GCGGCGCGGC GTACGTCAAC
CGCTTCCTGA CGCTGGTGTT CTGCGCGCTG CTCGCGATCA CGGCGGTGGC GACGATGGCG
GCGCCGTGGA TCGTCGCGGC GTCGGCCGGC AAGCTGGACG CCGCGCATCG GGCGCTCGCG
GTGTCCTTCG CGCGCTACTG CATGCCGCAG ATCTTCTTCT ACGGAGTCTT CGCGGTCGTC
GGGCAGGTGC TCGGCGCACG CGGGCGGTTC GGCCCGGCGG CGTGGGCGCC GGTGCTGAAC
AACATCGTGG TGGTCGCGGT GTTCGGCGGG TTCGTCGCGG TCGGCGGGGG AGCGGCGCAG
GGCGCTGACG GCCAGGCCGT GCTCAGTGCC GGGCAGAGCA TGTTCATCGG CATGGGGACG
ACCGCCGGCG TCGTCGTGCA GGCGGCTGTC GTGCTGTGGT TCCTGGCCGG TTCGGGCGTC
CGCTACCGTC CCCGCTTCGA CTGGCGCGGT GCGGGGCTCG GCCAGGCTGC CGCGCCGGCG
AAGTGGACGC TGGCCTACAT GCTCGTCGGC CAGGCGGTGA ACCTCCTGGT GATGTCCCTG
GCCACCGGTG TGGACCAGGC ACATCCGCAT CAAGCCGTCG GCTATGCCGC CTACTCCAAG
GCGCAGCAGA TCTGGATCCT GCCGCAGTCG GTCATCACCG TGTCGCTGCT GACGATGCTG
CTGCCGCGGA TGAGCCGCGC GGCGGCCGAC GACGACCCGG CTGCCGTGCG CCGCGACCTG
TCGCTCGGGC TGCGGGTCTC GGGGGCGGCG ATCGTGCCGT GCGCGTTCGC GTTCCTCGCC
CTCGGTCCGC AGTTCGCCGC CGTCTTGTTC GGCTACGGGC AGACCAGCCT GTCGCAGGCG
CACGGGATCG GCTTCATGCT CGCCGCCTCC GGCCTCGGGC TGATCCCGTT CTCGGCGCAG
TACGTGATTC TGCGCGGCTT CTACGCCTTC GGCGACACGC GGACGCCGTT CACCGTCGGG
CTGATCACCG GCGCGGTGAA CGCCGCGATC GCGATCGCGG CGACCGCATT CCTCGGCGGC
ACGCGCTGGC CGGTCGTGGT GATGGCCGCC GGCTCCGGGC TGTCCTCGGC GATCGGGCTG
GCCTGGTCCG TGCGCCGGCT GCGGCGGCGC CTCGCCGGGC CCAGCGCGGC CGCACCCGGC
AAGGGCGTGT CACGGGTCTA CCGCCGGCTG CTGCTGGCCG CGACCGTCGC CGGGCTGGTC
GGCTACGCCG CCGCGCAGGA CGTCGGGGCG CTCGCCGGGT CGGCGCGCGC CGCCTCGCTG
CTCGCCGCCG CGGCCGGGGG CACGGCTCTG GTCGTTGTCT ACGTTTTGGC GGCCAAGGCG
CTGCGCGTGG CGGAGGTGGA CCGTCTGACA CGCCGAGTGC GGTCCCGAAT CATGGGGTTG
ATTCCCAAGG CGGGATGA
|
|---|
| Protein sequence | MGAVSESETD PRRYAHAASV EAGRFEIPAV AGDWDTGMLR AITDPHPDLL AQLMPLRRGP
VQGPAVEDLW WPTAATPETS ATATATATAA APAPAPATAT AASATAAPAV PPAKKTSAGA
RSSAGMAAAT VVSRLGGMVA QLLQAAALGS SVLATTFTVG NTLPNMIYFL IIGGALNAVF
MPQLVAAMRR DADGGAAYVN RFLTLVFCAL LAITAVATMA APWIVAASAG KLDAAHRALA
VSFARYCMPQ IFFYGVFAVV GQVLGARGRF GPAAWAPVLN NIVVVAVFGG FVAVGGGAAQ
GADGQAVLSA GQSMFIGMGT TAGVVVQAAV VLWFLAGSGV RYRPRFDWRG AGLGQAAAPA
KWTLAYMLVG QAVNLLVMSL ATGVDQAHPH QAVGYAAYSK AQQIWILPQS VITVSLLTML
LPRMSRAAAD DDPAAVRRDL SLGLRVSGAA IVPCAFAFLA LGPQFAAVLF GYGQTSLSQA
HGIGFMLAAS GLGLIPFSAQ YVILRGFYAF GDTRTPFTVG LITGAVNAAI AIAATAFLGG
TRWPVVVMAA GSGLSSAIGL AWSVRRLRRR LAGPSAAAPG KGVSRVYRRL LLAATVAGLV
GYAAAQDVGA LAGSARAASL LAAAAGGTAL VVVYVLAAKA LRVAEVDRLT RRVRSRIMGL
IPKAG
|
|---|
| |