Gene Caci_4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4779 
Symbol 
ID8336133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5441371 
End bp5442654 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content73% 
IMG OID644957879 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003115481 
Protein GI256393917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.863308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTAC TCCGCCTGCC CTCTGCCGCG CGCACGTTCG CCACGGCTCT CATCGGGCGC 
CTGTCCTACG GCACGGTCTT CCTGTCCTTG ACTCTCGCCC TCGCCACCGG TCACGGCTCG
GTCAGCCGCG CCGGGGAGGT GGTCGCGGTG TTCGCGGTGG CCCTGGCGGG TCTGGCGCCG
TTGCGTGCTC GGCTGATCGA CCGCCACGGC ATCCGCCGCG TCCTGCTTCC CCTGGCTCTG
TCCTACGCGA CGGCGCTGGT CGGCCTGGCT GCGGCCACCT GGCGCCCGGC AACCCCGCTC
TGGCTTCTGG AGTTGCTGGC GGTCGCCGCC GGGTCCGCCG CTCCCCCGCT CGGTCCGACC
ATGCGCACGC TGTGGCGGAC GATGTGTGGC GAGGATCAGG CGCTGATGCA GCGCGCGTTC
AGCCTGGACA CCGTCGCCGA GGAGGTCATC GGCATCAGCG GTCCGCTGCT CGTCGGCCTG
CTGATCCTGG TCGCGAACCC GGCGACCGGC GTGCTGCTCA GCGCGGTCCT GGTCGCGGTC
GGGACCGTCG CGATGATGAC GTCGCCGGTC ATCGGCACCG TTTCGGCGCG GGCCGCGGCT
CAGGCCTCGG CCGGGAGCAC CGAAGGCGGG AACGGCGAGC GCCGAAAGGG CTCGGGCCGC
ACTATGTCCC GCAGCCTGTC CCGCATTCTC GACATCCTCG ACCCGGTGTC CGCCGCCGCC
GGCGTGGGCA TCGGCCTCGG CGCGCAGAGC CTGGCGATCG TGGCGTTCGC GGTGCGGCAT
CATCAGCCCT CGGCGATCGC CTGGGCCGAC GCCGGGATGT CCGCCGGCAG CATCCTCGGC
GGTCTGGCCT ACGGCGCGAT CAGCTGGCGG ATCTCCAGCC GCGCGCGGCT GCCGCTGCTG
ACCGCCGCGC TCGGGCTCAG CGTCGCGGTC GCGGCTCTCG CCCCGAACGT CTGGGTCCTG
ACCGCGATCA CCACGGCCTC CGGCGTGTTC GTCTCGCCGC TGATGGCGTG CGCGTACCTC
GTCGCCGACG AACTCGCCGA CGAGCGCTCG CGCACCAGCG CCGGCATGTG GGTCAACAAC
GCCTTCAACG CCGGCTCCTC CGGCGGCTAC GCGGCGATGG GCCCGGCGAT CGCCCGCATG
CCGCTGAGCT GGTGCTTCGT GGTCGCCGCC GCGCCGGTTG TGGTGGGTGC CGGTGTCGCG
CAGGCTTGGC GTTCGCGAAC CGGCAGCCGC CAGGCACAGC CGCTTAGCGA CGCTACAGCC
GAGACCGAAG CGCTGTCTGT CTAA
 
Protein sequence
MAVLRLPSAA RTFATALIGR LSYGTVFLSL TLALATGHGS VSRAGEVVAV FAVALAGLAP 
LRARLIDRHG IRRVLLPLAL SYATALVGLA AATWRPATPL WLLELLAVAA GSAAPPLGPT
MRTLWRTMCG EDQALMQRAF SLDTVAEEVI GISGPLLVGL LILVANPATG VLLSAVLVAV
GTVAMMTSPV IGTVSARAAA QASAGSTEGG NGERRKGSGR TMSRSLSRIL DILDPVSAAA
GVGIGLGAQS LAIVAFAVRH HQPSAIAWAD AGMSAGSILG GLAYGAISWR ISSRARLPLL
TAALGLSVAV AALAPNVWVL TAITTASGVF VSPLMACAYL VADELADERS RTSAGMWVNN
AFNAGSSGGY AAMGPAIARM PLSWCFVVAA APVVVGAGVA QAWRSRTGSR QAQPLSDATA
ETEALSV