Gene Caci_4768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4768 
Symbol 
ID8336122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5429456 
End bp5430289 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID644957868 
ProductPalmitoyl-CoA hydrolase 
Protein accessionYP_003115470 
Protein GI256393906 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCACCT TCGAGTCCCT CATGGACCTG CTCGAACTGG AGCGGATCGA GGACGACCTG 
TTCCGGGGCG CCTCACCGGA CACCGACGTG CAGCGCGTCT TCGGCGGACA GGTCCTGGGA
CAGGCGCTGT CCGCCGCCAC CGCCACGGTC GAGCCGGACC GGAACGTGCA CTCCCTGCAC
GGCTACTTCC TGCTGCCCGG GGACCCCGCG GCGCCGATCG TGTACGAGGT CGACCGCTCG
CGCACCGGGC GGTCGTTCTC CACGCGGCGG GTGGTGGCGC GCCAGCACGG CCGGAACATC
TTCGTCATGT CGGCGTCCTA CCAGATCCCC GAACCGGGCC TGGACCACGC CGACCCGCGC
CCGGACGCCC CCGACCCCGA GTCGCTGCCG GCGATCCCGC CGAGCCCGGC CGACGACGGG
GAGGACGCGC TGTGGAACAT CCTCTACCGG CGCTGGACCG CCTTCGACAT CCGCCGGGTC
CCGGACACCG GGCCGGAGCG GCGGCAGGTG TGGCTGCGCA CCTCCGCGCC ACTGCCCGAC
GACCCGCACC TGCACACCGC GGTGCTGGCG TACGTCTCGG ACCTGACGCT GCTGTCCACG
ACGCTGATCC GGCACAAGCT GCTGCCGCAC AAGGAGGTGC AGATCGCCTC GCTGGACCAC
GCGATCTGGT TCCACCGCCC GGCGCGCGCC GACCAGTGGC TGCTGTACGA CCAGGCTTCC
CCGTCGGCCT CGGGCGCCCG CGGGCTGGCC ACGGGGCGGC TGTTCACACG AGAGGGGACG
CTGGTGGCAA CTGTCGTGCA GGAGGGACTG CTGCGGGTCA ACCCGGCACC CTGA
 
Protein sequence
MATFESLMDL LELERIEDDL FRGASPDTDV QRVFGGQVLG QALSAATATV EPDRNVHSLH 
GYFLLPGDPA APIVYEVDRS RTGRSFSTRR VVARQHGRNI FVMSASYQIP EPGLDHADPR
PDAPDPESLP AIPPSPADDG EDALWNILYR RWTAFDIRRV PDTGPERRQV WLRTSAPLPD
DPHLHTAVLA YVSDLTLLST TLIRHKLLPH KEVQIASLDH AIWFHRPARA DQWLLYDQAS
PSASGARGLA TGRLFTREGT LVATVVQEGL LRVNPAP