| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4760 |
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| Symbol | |
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| ID | 8336114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5422912 |
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| End bp | 5423976 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957860 |
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| Product | integrase family protein |
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| Protein accession | YP_003115462 |
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| Protein GI | 256393898 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAATC CCCTGAGCCC CGAGGCTGAG CCCACTGATC CCGCCGGGCG TTCCGGGTCT
GCCAAGCCCT CCGAGCCTTC CGGGCCCTCC GAGCCGGGTT CGGCTGTCGT CGTCTCCGTC
ATCCCCGGCG CTCTGGCAGC GCTCGGTCAC GGCGGCGCCG GTCCTCGGGC TGAGCAGGTC
GCGGCGCTGT TCCTGCTCAC CTACAAGTCC ACGACCGCGT CGGCGTACGC GGTCGATCTG
AAGCAGTGGT TCGCCTGGTG CGCGCTGTTC GACGTCGATC CCTTCGACGC GGTGCGGGCT
CATGTGGACA CCTGGGCCGT GCATCTGGCC GACGAAGGAC GGGCCCGCCC CGCCACGCTC
GCTCGCAAGA TCAGTGCCGT GCGGAACTTC TACGCCTACG CCGTCGACTC CGGCTACACG
TCCAGCAGCC CGGTCCCGAT CAAGGACAAG GCGCTGCACC TGCCGCGTGT CTCGCGCAAG
TCGCAGACGC TCGGGCCCGA TCGCGAGGAG TCGGCGGCGA TGCTGGAGGC GGCGGCGCAG
CGCGGCGTGC GGGACGAGGC GGTGGTCGCT GTGCTGCTGT ATCAGGGACT GCGCGTGTCG
GAGTTGTGCG GGATCAACGT GGAAGACCTG TCCAGCCAGC GCGGGCACCG GGTCGTACGG
CTGCGGCGCA AGGGCGGCGA GGAGCAGGAC CAGGCGATCG CGCCGCCCGC CGCCGGCTGC
CTGGACGCCT GGCTCGCTGA GCGTGCTCGG GACTCCGCTT TCGGCGCGGT TCCTGCCTCC
GGGCCGGTGT TCGTCGGTCC CGAGGGCGCG CGCCTGACGC GGTATCAGGT CGAGTGGATC
GTCGAGTCCT GCGCGCGGGC GGCCGGGGTC GAGAAGAAGA TCAGTCCGCA CTCGCTGCGG
CACGCCTGCA CCACGATGCT GCTGGACGCC GGGGTGCCGC TGCGCGACAT CCAGGTCTAC
ATGGGGCACG CGAATTCGGC CACTACGGAA CGGTACGACC TTGGGCGCCA ACACCTTGAT
AAATCGCCCG CCTACGCATT GTCCGGGGTG TTTGCGCGAG ACTGA
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| Protein sequence | MSNPLSPEAE PTDPAGRSGS AKPSEPSGPS EPGSAVVVSV IPGALAALGH GGAGPRAEQV
AALFLLTYKS TTASAYAVDL KQWFAWCALF DVDPFDAVRA HVDTWAVHLA DEGRARPATL
ARKISAVRNF YAYAVDSGYT SSSPVPIKDK ALHLPRVSRK SQTLGPDREE SAAMLEAAAQ
RGVRDEAVVA VLLYQGLRVS ELCGINVEDL SSQRGHRVVR LRRKGGEEQD QAIAPPAAGC
LDAWLAERAR DSAFGAVPAS GPVFVGPEGA RLTRYQVEWI VESCARAAGV EKKISPHSLR
HACTTMLLDA GVPLRDIQVY MGHANSATTE RYDLGRQHLD KSPAYALSGV FARD
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