Gene Caci_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4754 
Symbol 
ID8336108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5417491 
End bp5418333 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content71% 
IMG OID644957854 
Productprotein of unknown function DUF574 
Protein accessionYP_003115456 
Protein GI256393892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AGTCGATCAG CGAGGACGGC GGCGCGCTGT TGCCGGACTG GGAACCCCCG 
GAGATAGACC GCAGCAAGGC CCATCCCGCG CGGATCTACG ACTACCTGCT CGGCGGCAAG
GACAACTTCG ACGTCGACCG CGAGGCCGCC GAGGTCGCCC TGGGCCTGAT GCCCGAGCTG
CGCGGCATGG CCCGGGTCAA TCGCGCCTTC CTCGGCCGCG CCGTGCGCCA CCTCGCCGAG
GCCGGCATCA CCCAGTTCCT CGACATCGGC ACCGGCATTC CCGGACCGGG CAACACCGGC
GAGATCGCCC GCCAGGTCCA CCCCGACGCC CGCGTGGTCT ACGTCGACTA CGACCCGATC
GTCTCCGCGC ACTCCCGCGC CCTGCTCTCC GGCGCCGACC CGGCGCTGAC CGCGATCGTG
CAGGCCGACG TCCGCGAACC GAAGACCATC CTGGACAACG GCACCGTCCA CGCGATCCTG
GACTTCGACC GGCCGGTCGC GGTCCTGATG GTCGCGCTGC TGCACTTCGT CTCCGACGCC
GAGGACGCCC ACGCCATCGC CGCGACGTTC GTCGATGCCC TGGCGCCCGG CAGTGCCCTG
GTCGTCTCGC ACGCCTCCGA GGGCCACGAG CCCGGCAAGT TCGGCGCCGC CCGCTCGGGC
TGGAACAACG CCACCTCCCA GCTGGTGCTG CGCGACCGCG AGGAGATCGA GCGGTTCTTC
ACCGGCACCG AGCTGCTCGA GCCCGGCGTC GTGATCATCC CCGGCTGGCG CCCGGACCAC
GACCTCACCG ACGAGGAACG GTCGCTGGAC TACGGACACG CGGCGGTCGG GATCAAGAGG
TAG
 
Protein sequence
MTDESISEDG GALLPDWEPP EIDRSKAHPA RIYDYLLGGK DNFDVDREAA EVALGLMPEL 
RGMARVNRAF LGRAVRHLAE AGITQFLDIG TGIPGPGNTG EIARQVHPDA RVVYVDYDPI
VSAHSRALLS GADPALTAIV QADVREPKTI LDNGTVHAIL DFDRPVAVLM VALLHFVSDA
EDAHAIAATF VDALAPGSAL VVSHASEGHE PGKFGAARSG WNNATSQLVL RDREEIERFF
TGTELLEPGV VIIPGWRPDH DLTDEERSLD YGHAAVGIKR