| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4746 |
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| Symbol | |
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| ID | 8336100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5411336 |
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| End bp | 5412493 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644957846 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003115448 |
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| Protein GI | 256393884 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGAGT TCGACGAGTC CCGGCTCCGG GATCTGGTCC CGGCGGTGAT CAGCGTTCTG
GTCCGGCGCG GCGCGGACTT CGCCTCGGCC GAGGACGCCG TGCAGGAGGC GCTGATCAGA
GCCCTGCAGC TCTGGCCGGA GGACCCGCCG CGCGACCCGA AGGGCTGGCT GGTCACCGCC
GCGTGGCACA AGTTCGTCGA CGCCGCCCGC GCCGAGGCCT CCCGGCAGCG GCGCGAGCTG
GCCGTCGACG CCGAGCCGCC GGCAGGCTCG GCGCCGGCAG GCGACGACAC CCTGCGCCTG
TACTTCCTGT GCGCGCACCC GACGCTGTCC TCGGCGGCGG CCGTCGCCCT GACCCTGCGC
GCGGTCGGCG GCCTGACCAC GCGCCAGATC GCGCAGGCGT GCCTGGTCCC GGAGGCGACG
ATGGCGCAGC GCATCGTTCG CGCCAAGCGC CGCATCGAAG GGCTGCCGCT GGACCAGCAC
GGCGACCTGG CGACCGTGCT GCGCGTCCTG TACCTGGTCT TCAACGAGGG CTACGGCGGC
GACATCGACC TGGCTGCCGA GGCGATCCGG CTGACCCGCC AACTCATCGC CCTGACCGAC
GACGACCCCG AAGTCGGCGG CCTGCTCGCC CTGATGCTGC TGCACCATGC GCGCCGTGCG
TCCCGCACCA CTCCCGGCGG CGGCCTGATC CCGCTGGCGG AGCAGGACCG CGCGCTGTGG
GACACCGCGC TGATCGCCGA GGGCGTCGCG ATCCTGCAGA CCGCCCTGGC CCGCGACCGG
CTCGGCGAGT ACCAGGCGCA GGCGGCGATC GCAGCCCTGC ACGCCGACGC GCCGAACGTC
GAGGAGACCG ACTGGGTGCA GATCGTGGAG TGGTACGACG AACTCACGGC CCTGACGGAC
AGCCCGGTGG TGCGGCTCAA CCGCGCGGTG GCGGTCGGCG AGGCCGACGG GGCGCGCGCG
GGGCTGGCGG CGCTCGCCGA GGTGGACGCC GACGTGCCGC GGCGCAGTGC GGTGGCGGCG
TATCTGCATG AGCGCGCGGG GGATTCGGCG CTGGCTGCCG GGCTGTACGC GGAGGCTTCG
CACGCTGCGA CGAGCGTGCA GGAGCGGGAC TATCTGGCGC GGGAGGCGGC TCGGGTGCGG
CAGGCGGTGG GGTCTTAG
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| Protein sequence | MNEFDESRLR DLVPAVISVL VRRGADFASA EDAVQEALIR ALQLWPEDPP RDPKGWLVTA
AWHKFVDAAR AEASRQRREL AVDAEPPAGS APAGDDTLRL YFLCAHPTLS SAAAVALTLR
AVGGLTTRQI AQACLVPEAT MAQRIVRAKR RIEGLPLDQH GDLATVLRVL YLVFNEGYGG
DIDLAAEAIR LTRQLIALTD DDPEVGGLLA LMLLHHARRA SRTTPGGGLI PLAEQDRALW
DTALIAEGVA ILQTALARDR LGEYQAQAAI AALHADAPNV EETDWVQIVE WYDELTALTD
SPVVRLNRAV AVGEADGARA GLAALAEVDA DVPRRSAVAA YLHERAGDSA LAAGLYAEAS
HAATSVQERD YLAREAARVR QAVGS
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