| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4740 |
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| Symbol | |
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| ID | 8336094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5406084 |
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| End bp | 5407631 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644957840 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003115442 |
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| Protein GI | 256393878 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGC GCGACCTGCT GGACACCCCG ATGCCCGGGC TGGAACTGCT GACCGGCACC
GACCCCCTGC TGGAGCGCGA GATCAGCTGG GTCGCGACCA CCGACCTGCT GGACCCGGGC
CGCTATCTCA ACGGCGGCGA GCTGGTGCTG ACCGGGCTGA TCTGGCGGCG CGAGCCAAGG
GACTCCGAGC GCTTCGCGCG GGCGGTCGCC GAGGCCGGAG CCGCGGCGAT AGCGGCCGGG
GACGCCTCCG GCGCGCCGAT CCCGCGCGAC CTGATCCGCG CCTGCCGGGC ACACCGCACG
CCGCTGTTCC GCGTGCCGAC CGAGCTGGCC TTCGCCACCC TCACCGAGCA CCTGGCCCGG
CACCTGTCCG CCGAGCGCGC CGCCGACATC GGCTCGGTCC TGGAACGCCA CGGCCGCCTG
GCCTCGGCCT CGGCCGCCGG CACCGCGCTC GCCCCGATCC TGGACCTGCT GGCGCAGGAC
CTCGGCATGC CCTGCTGGGT CCTCACCCCC GCCGGACGCC CGGTCGCCGC CTCGCACGAG
CCGCTGCCGC CCTCGGAGAC CGAGGCGACC GTCCGCGAGG CGCTGCGCGC CGGGCAGCTC
CCGGCCCGGA TCCGCCGCCG CTCGGTGTTC GCCATCAGCT CCGGCTCGCC GCTGACCGAC
TGGTACCTGG TCTTCGACGG CGACTACGAA CGCTGGGACC CCCGGCGCCA GGCGCTGGCC
TCCAAAGCCG CGGCGGTCCT GGCGATCGAG CGCGAACGGC TGGCCGCGCG CCGCGAACCG
CTGCGCCAGC TCGGCGCCGA CCTGGTCCGC CTGATCGCCG AGGACGGCGG CGTCGCCGAG
ATCGCCGCCC GTGCCGACCT GGTCGGCGTC GGGGCGGACA CCGAGGTGCA GGCGGTGGCG
CTGGCCGGTC CGGCGCACCA CTCCGGCGCG ATCCTGCGGG CACTGCTGGA GGACGTCACC
GAGGAGCTGC GGCTGCGCGG GCAGCGCCGG GACGCCGCGG CCGACCACGA CGTCCCGGTC
GCGGAGTTCG CCGACCACGC GGTGGCACTG GTCCCGAACC CTCCGCCGGA CGTCGCCGGG
CACCTGCGCG ACCTGCTCGG CGGCATGACC GCCGGGCTCG GCCGGGAACA CCTGGCGATC
GGCGTCGGCA GCCGCCGGGC GGCGGGACTG CGCGCGACCG TCGACGAGGC CCGGCACGCG
CTGCGCATCG GACGCGCGCG CAGCGACCAG GTGAGCGTCA TCGGGCACGA GGAGCTGGCC
TCGCACGTGC TGCTGCTGTC CGGGCTGCCG GAGGACGTGC GGGTCGCGTA TCGCGACCGG
CTGCTCGGGC CGCTGCGGGC GTACGACGCG CTGCACCGCT CCGACCTGGA GGCCACGCTG
GAGGCTTTCC TGGCGTGCTC GACGTCCTGG ACGCGGTGCG CCGAGCAGAT GCACGTCCAC
GTCAACACAC TGCGATACCG GGTGGCGCGC ATCGAGGAGC TGACCGGGCG GAGCCTGGCT
GACCTGGAGA CGCAGGTGGA TCTTTTTCTG GCGCTTCGGC TGCGGTAG
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| Protein sequence | MRLRDLLDTP MPGLELLTGT DPLLEREISW VATTDLLDPG RYLNGGELVL TGLIWRREPR
DSERFARAVA EAGAAAIAAG DASGAPIPRD LIRACRAHRT PLFRVPTELA FATLTEHLAR
HLSAERAADI GSVLERHGRL ASASAAGTAL APILDLLAQD LGMPCWVLTP AGRPVAASHE
PLPPSETEAT VREALRAGQL PARIRRRSVF AISSGSPLTD WYLVFDGDYE RWDPRRQALA
SKAAAVLAIE RERLAARREP LRQLGADLVR LIAEDGGVAE IAARADLVGV GADTEVQAVA
LAGPAHHSGA ILRALLEDVT EELRLRGQRR DAAADHDVPV AEFADHAVAL VPNPPPDVAG
HLRDLLGGMT AGLGREHLAI GVGSRRAAGL RATVDEARHA LRIGRARSDQ VSVIGHEELA
SHVLLLSGLP EDVRVAYRDR LLGPLRAYDA LHRSDLEATL EAFLACSTSW TRCAEQMHVH
VNTLRYRVAR IEELTGRSLA DLETQVDLFL ALRLR
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