Gene Caci_4739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4739 
Symbol 
ID8336093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5405130 
End bp5405825 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content77% 
IMG OID644957839 
ProductOHCU decarboxylase 
Protein accessionYP_003115441 
Protein GI256393877 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03180] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAG ACGCCCGCCG CGAGGCGGTG GCCGCGCTGA ACGCGTGGTC CGCGGAGCAG 
GCGACGCAGG AGCTGTCGGC CTGCTGCGCG AGCCGCCGCT GGACCGCGGC CGTGGCGGAC
GGACGGCCCT ACGGCGGCTG GGCCGAGCTG GCCTCCGCCG CGACCGCGGG GATCAAGGCG
CTCCGGTGGT CCGACGTGCT GGAGGCGCTG GACGCCCACC CGCGGATCGG CGACCGGGCA
GCGGGGCAGT CGCGGGAGGC GGCGTGGTCG CGCGCCGAGC AGTCGGCCGC TGCCGGCAGC
GCCGAATCGG TCCGGCAGGA GGTCACCCGC GCCAATGCGG AGTATGAGCA GGCCTTCGGC
CACGTCTTCC TGATCCGCGC GGCCGGCCGC TCCGCCGAGG AGATCCTCGC CGAAGCCCGG
CGCCGGCTCG GCAACGACGC GGCCGCCGAG CAGCGGGAGG TGCGTGCCGA ACTCGCGCAG
ATCGTGCTGC TGCGGTTGGA ACGCCTCGCC GAAGCGGCAG CCGCTGCTGA GCCCGCAGCC
GCACCCGCAC CGGCCGCAGC CGAATCCGCC GCCGCAGCCA CCGCCGCATC CACCGCGCCC
GCCACCGCCA CACCTGCATC CGCCGCGCCC GCCGCAGTCA CCGCCGCACC CGCACCCGCA
CCCGAACCCG GGACGCCGAT CGGAGCGGCC GGATGA
 
Protein sequence
MPEDARREAV AALNAWSAEQ ATQELSACCA SRRWTAAVAD GRPYGGWAEL ASAATAGIKA 
LRWSDVLEAL DAHPRIGDRA AGQSREAAWS RAEQSAAAGS AESVRQEVTR ANAEYEQAFG
HVFLIRAAGR SAEEILAEAR RRLGNDAAAE QREVRAELAQ IVLLRLERLA EAAAAAEPAA
APAPAAAESA AAATAASTAP ATATPASAAP AAVTAAPAPA PEPGTPIGAA G