Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4739 |
Symbol | |
ID | 8336093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5405130 |
End bp | 5405825 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644957839 |
Product | OHCU decarboxylase |
Protein accession | YP_003115441 |
Protein GI | 256393877 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03180] OHCU decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG ACGCCCGCCG CGAGGCGGTG GCCGCGCTGA ACGCGTGGTC CGCGGAGCAG GCGACGCAGG AGCTGTCGGC CTGCTGCGCG AGCCGCCGCT GGACCGCGGC CGTGGCGGAC GGACGGCCCT ACGGCGGCTG GGCCGAGCTG GCCTCCGCCG CGACCGCGGG GATCAAGGCG CTCCGGTGGT CCGACGTGCT GGAGGCGCTG GACGCCCACC CGCGGATCGG CGACCGGGCA GCGGGGCAGT CGCGGGAGGC GGCGTGGTCG CGCGCCGAGC AGTCGGCCGC TGCCGGCAGC GCCGAATCGG TCCGGCAGGA GGTCACCCGC GCCAATGCGG AGTATGAGCA GGCCTTCGGC CACGTCTTCC TGATCCGCGC GGCCGGCCGC TCCGCCGAGG AGATCCTCGC CGAAGCCCGG CGCCGGCTCG GCAACGACGC GGCCGCCGAG CAGCGGGAGG TGCGTGCCGA ACTCGCGCAG ATCGTGCTGC TGCGGTTGGA ACGCCTCGCC GAAGCGGCAG CCGCTGCTGA GCCCGCAGCC GCACCCGCAC CGGCCGCAGC CGAATCCGCC GCCGCAGCCA CCGCCGCATC CACCGCGCCC GCCACCGCCA CACCTGCATC CGCCGCGCCC GCCGCAGTCA CCGCCGCACC CGCACCCGCA CCCGAACCCG GGACGCCGAT CGGAGCGGCC GGATGA
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Protein sequence | MPEDARREAV AALNAWSAEQ ATQELSACCA SRRWTAAVAD GRPYGGWAEL ASAATAGIKA LRWSDVLEAL DAHPRIGDRA AGQSREAAWS RAEQSAAAGS AESVRQEVTR ANAEYEQAFG HVFLIRAAGR SAEEILAEAR RRLGNDAAAE QREVRAELAQ IVLLRLERLA EAAAAAEPAA APAPAAAESA AAATAASTAP ATATPASAAP AAVTAAPAPA PEPGTPIGAA G
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