Gene Caci_4729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4729 
Symbol 
ID8336083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5395288 
End bp5396193 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID644957829 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_003115431 
Protein GI256393867 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA AGACAGGCTT CATCGGCCTG GGGATCATGG GATCTCCGAT GGCTGCGAAC 
CTGGTCAAGG CCGGGTTCGA GGTCACCGGC TACGACCTGA ACGCCCCGAA CGTCGCCAAG
CTCGCCGCCG CAGGGGGAAC CGGCGCGGCC TCGATCGCCG AGGCGATCGA GGGCGCCGAG
GTCGTGATCA CCATGCTGCC CGCGCATCCG CACGTCGCCG CGGCGGTCCT CGGCGCGGGC
GGGGTGTTCG AGACCGTCAA GCCCGGCACG CTGTTCATCG ACTTCTCCAC CATCCGCCCC
GAGACCTCGA TCGAGGTCGC CCAGGCCGGT GCGGCGCGGG GTGTGCGCGT GCTGGACGCC
CCGGTCTCCG GCGGCGAGAA GGGCGCGATC GACGCGGTCC TGTCCATCAT GGTCGGCGGC
GAGCCCGAGG TCTTCGCCGC CGCGCGTCCG GTGTTCGACG CGGTCGGCAA GGTCGCGGCG
CTGTGCGGCC CGGCCGGGTC CGGGCAGGTG GTCAAGGCTG CGAACCAGCT GGTCGTCGGC
GGTACGTACG CACTGGTCGC CGAGGCGATC GTGCTGATGG AGGCCGCCGG CGTGGACGCC
GCCGCAGGCC TGGACATGCT CGCCGGCGGC CTGGCCGGCT CCCGGATCCT GGAGCTGAAG
CGGGCCTCGA TGCTCGCCCG CGACTTCAAG CCCGGATTCC GGATCGACCT GCACCACAAG
GACATGGGCA TCGCCCTGGA CGCGGCGCGG CAGGCCGAGG TGGCGCTGCC GCTGACCAGC
CTGGTCGCCG CGCTGATCCA GGCCGCGCGC GCTCAGGGCC TGGGCGACCA GGACCACTCC
GCGCTGCTGG CTGTGGCCGA GAACCTGTCC GGCCGTTCCG GCCGCTCCGC ACGAAAGGCG
AACTGA
 
Protein sequence
MSTKTGFIGL GIMGSPMAAN LVKAGFEVTG YDLNAPNVAK LAAAGGTGAA SIAEAIEGAE 
VVITMLPAHP HVAAAVLGAG GVFETVKPGT LFIDFSTIRP ETSIEVAQAG AARGVRVLDA
PVSGGEKGAI DAVLSIMVGG EPEVFAAARP VFDAVGKVAA LCGPAGSGQV VKAANQLVVG
GTYALVAEAI VLMEAAGVDA AAGLDMLAGG LAGSRILELK RASMLARDFK PGFRIDLHHK
DMGIALDAAR QAEVALPLTS LVAALIQAAR AQGLGDQDHS ALLAVAENLS GRSGRSARKA
N