| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4723 |
|---|
| Symbol | |
|---|
| ID | 8336077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5386679 |
|---|
| End bp | 5387920 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644957823 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003115425 |
|---|
| Protein GI | 256393861 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0900603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTGA CCACAGTCGA ACATCAGGGA CACCTGCCCG GTACCGCCGA ATACCGCCGT
GTCCTCACCG CCCTGTTCGC CGCCGGCATC GCCACCTTCG TCCTGCTCTA CGACACCCAG
GCGCTGCTCC CCGACCTCGC GCACGCCTTC CACGTCTCCC CGGCCGAAAG CACGCTCTCG
GTCTCGGCGA CCACCGTCGG CCTGGCCGTG GCGCTGCTGG TGTTCGGACC GCTGTCCGAA
GCGCTGGGTC GCACGGTCCT GATCCGCTTC TCCATGGCCG CCTCGGCGGT GCTGGCGCTC
GCCTGCGCGG CGGCTCCCAC CTGGGACTCG CTGATCGCGA TCCGGCTGCT GGCCGGGGTG
GCGCTCGCGG GTCTGCCGGC GGTCGCCACC GCCTACCTGC GCGAGGAGAT GCACCCCTCG
GCGCAGGCGC GCGCCGCAGG GCTCTACATC GGCGGGACCG CGATCGGCGG GATGGCGGCG
CGGCTGGTCA CGGCGCCGAT CGCCGAGGCG GCGGGGTGGC GGTGGGCGCT GCTGGCCGCT
GCGGCGCTGT CCACGGCGTG CGCGGTCGTC GTCGCGGTCA CCCTGCCGCC GTCGCGCCAC
TTCGTGGCGA CCCGGCTGCG CGGCCGGACC GTGCTCGCGA TGCAGCGCCG GGCCCTGGCG
GACCCGGCGC TGCTGGCTCT GTACGCGCTC GGCGCCTGCG CGGTCGGCGC GCTGGTGGCG
GTGTTCAACG CGGTGGGCTT TCGGCTCACC GCCGCGCCGT TCCACCTGGG GGTCGGGCTG
GTGAGCCTGA TATTCCTGAC CTACTCGCTG GGGACCGTCA GCTCGACGGT GTCCGGGCGG
CTGGCCGACC GGCTCGGGCG GCGGGCGATC GCGCCGATCG GGTGCGCGGT CGCCTTCGGC
GGGGTACTGC TGACGCTGAC CGGCTCGCTG CCGGTGGTGA TCGTCGGGAT CGCGGCGCTG
ACCGTCGGGT TCTTCGCCGT GCACGGCCTG GCCAGCGGCT GGGTGACGGC GCGCTCGCAC
GCCTCCGGCG CCAGTCCCAG CCAGGCCGCG GCGTTCTATC TGTTCTCGTA CTACGTCGGC
TCGTCGGTCT TCGGCAACAT GGGCGGCCGG GCCTGGTCGG CCGACGGGTG GCCGGGCGTG
GTCACGGTAG CGGGCTCGTT GCTGGGGATC GCTGGAGTAC TAGCGCTGGC GCTGCGTCGG
ATCCCGCCGC TGGTCCCGCC GTCGCCGGCG GCCGTGCCGT GA
|
|---|
| Protein sequence | MPVTTVEHQG HLPGTAEYRR VLTALFAAGI ATFVLLYDTQ ALLPDLAHAF HVSPAESTLS
VSATTVGLAV ALLVFGPLSE ALGRTVLIRF SMAASAVLAL ACAAAPTWDS LIAIRLLAGV
ALAGLPAVAT AYLREEMHPS AQARAAGLYI GGTAIGGMAA RLVTAPIAEA AGWRWALLAA
AALSTACAVV VAVTLPPSRH FVATRLRGRT VLAMQRRALA DPALLALYAL GACAVGALVA
VFNAVGFRLT AAPFHLGVGL VSLIFLTYSL GTVSSTVSGR LADRLGRRAI APIGCAVAFG
GVLLTLTGSL PVVIVGIAAL TVGFFAVHGL ASGWVTARSH ASGASPSQAA AFYLFSYYVG
SSVFGNMGGR AWSADGWPGV VTVAGSLLGI AGVLALALRR IPPLVPPSPA AVP
|
|---|
| |