Gene Caci_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4712 
Symbol 
ID8336066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5372860 
End bp5374149 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content74% 
IMG OID644957812 
Productserine protease 
Protein accessionYP_003115414 
Protein GI256393850 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4934] Predicted protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC GTTTCACCCC GCCCGCCGCG AGATTCCTGC GGCGCTCCGG CGCCCGCGTC 
GCAGCGCTCG GCGCGGCGTT CGCCCTCGTC CTGGCGGTCA CGGCGCCGGC GGGCGCCGAG
GCCGCCGGCG CGAGCGCGGC TGCCGGCGCC CGGCCGGCCG CGTCCCCGAT CGTCCCGTTC
GGGTGCGCGA AGGTCGTCAC GGGCAAGGCA CACTGCCTGG GGCAGGGGCG GCTGATACCG
AACGCCTCCG GGAGCCCGAC CAGCTCCGGG CTCAAGCCCG CGGACCTGAT AGCGGCGTAC
AAGCTCGCCG GGACCAACGG CGCCGGGCGG ACCGTGGCGA TCGTCGACGC CTTCGACGAC
CCGAACGCGG CCGCGGACCT GGCGGCGTAC CGCAGCGCCT ACAACCTGCC GGCGTGCACC
GCGGCGAGCG GCTGCTTCCA GAAGGTGAAC CAGAGCGGGC AGGCCTCGCC GCTGCCCGCC
GCGGACTACG GCTGGGCGGA GGAGGAGAGT CTGGACCTTG ACATGGTCTC GGCGATCTGC
CCCGGCTGCC ACATCCTGTT GGTGGAGGCC AGTGGCGCGG ACACCGCCTC GCTGACCACC
GCCGAGGACA CCGCGGCGGC GGCGCCCGGC GTGGTGTCGA TCTCCAACAG CTGGGGCGCG
GCGGAGGACA GCTCGACGCT TGCCGCCGAC GCGCACTTCA ACCACCCCGG CAAGGCGATC
ACCGCCAGCT CCGGTGACAG CGGCTACGGC GTCAGTTGGC CGGCGGCCTC GCAGTACGTC
ACCGCGGTCG GCGGCACCAG CTTGAGCGCC GCGTCCAACG CCCGCGGCTG GACCGAGACC
GCGTGGTCCG GCGCCGGCAG CGGCTGTTCG GTGCAGGAGC CCAAGCCCTC GTGGCAGACC
GATTCGGGCT GCGCGCACCG CACGGTCGCC GACGTGTCCG CGGTCGCCGA CCCGAACACC
GGCGTGGCCG TGTACGACAC CGCGAACAGC TGCGGCGGCG GGGCGTTCTG CGACCTGCTG
CTGGCCCTGG GCCTGGCCAC CGGCGCCGAC GGCTGGGTGC AGGTCGGCGG GACCAGCGCG
TCCTCGCCGA TCATCGCCTC GGTCTACGCG CTGGCCGGGA ACACCGGATC GCTCGTGTAC
GGCTCCCAGC CGTACAAGAA CGCCGGATCG CTGTTCGACG TCACCAGCGG GAACAACGGC
ACGTGCACGC CGGCGTACCT GTGCACCGCC GGGACCGGCT ACGACGGCCC GACCGGGCTG
GGCTCGCCGA ACGGGACCGG GGCGTTCTGA
 
Protein sequence
MIDRFTPPAA RFLRRSGARV AALGAAFALV LAVTAPAGAE AAGASAAAGA RPAASPIVPF 
GCAKVVTGKA HCLGQGRLIP NASGSPTSSG LKPADLIAAY KLAGTNGAGR TVAIVDAFDD
PNAAADLAAY RSAYNLPACT AASGCFQKVN QSGQASPLPA ADYGWAEEES LDLDMVSAIC
PGCHILLVEA SGADTASLTT AEDTAAAAPG VVSISNSWGA AEDSSTLAAD AHFNHPGKAI
TASSGDSGYG VSWPAASQYV TAVGGTSLSA ASNARGWTET AWSGAGSGCS VQEPKPSWQT
DSGCAHRTVA DVSAVADPNT GVAVYDTANS CGGGAFCDLL LALGLATGAD GWVQVGGTSA
SSPIIASVYA LAGNTGSLVY GSQPYKNAGS LFDVTSGNNG TCTPAYLCTA GTGYDGPTGL
GSPNGTGAF