Gene Caci_4710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4710 
Symbol 
ID8336064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5369128 
End bp5372049 
Gene Length2922 bp 
Protein Length973 aa 
Translation table11 
GC content76% 
IMG OID644957810 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003115412 
Protein GI256393848 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0640272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTTC CCTCCCGGCA CGCCGAGGAC CACACCGAGA CCGTCGCGTG GTCCGGAGCG 
GGCTTCGCCT TCGTCGGGCG CGAGCGCGAG CTCGGGCTGC TGCTGGCCGG CGTCCGGCAT
CCCCCGGCGG TGGTGCTGGT CGAGGGCGAG GCCGGGATCG GCAAGTCCCG GCTGGTGCAC
GAGGCGGCCG CCGCCGTGGC CGCCGCCGGC CGCCGGGTGC TGACCGGGCT GTGCCACCCG
CTGCGCGAGC CCTACCCCTA CGGCCCGGTC ATCGACGCGC TGCGCAAGGC CGGCGACTGG
CTGCCGCCGG TCGCCGACCT GCCGCCGAGC GCCGGCGTGC TGGCGCCGCT GCTGCCCGAT
CTGGCCGCGC GGCTCCCGGC GGCGCCGCGC CCGGCCGCCG ACGCGCACGC CAAGCGCTTC
CAGCTGGTCA ACGGCCTGCG CTCGTTCCTG GCCGCGCTGG GACCGGCGGT CCTGGTCGTC
GAGGACGCGC ACTGGATCGA CGAGGCCACC CGCGAACTGC TCCTGCTGCT CACCCGGGAC
ATGCCCGAGC AGCTGAGCCT GGTGCTCACC TACCGGAACG AGGACCTGCC GCCGGGCGGA
TCGGTCCTCG GCCCGGCCTA CCGCCGCCAG CCCGGCGTCA GCGGCGCCGC GATCCACCTG
AACCCGCTGT CGGGACCGGA CGTGCAGGCC TTGGCGCACG CCGCCCTGGG CCCGCACGCC
ACCGTCGAGC TGAGCACCGT GCTGTACCAG CGCAGCGAGG GACTGCCGCT GGCCGCCGAG
GAAGACCTGA TCACCCTGGC CGAACGCGGT CCCGGCGAAG GCCCGGATCC GCCCGGCAGC
CTCCTGGACG ATCTGGCGCA CGCCGAGGTG CCGCGCGGGC TGCGCGAGGC GTTCACCGAG
CGTCTGAGCG CGCTGTCGGC GGCGGCGCGG ACCGTGGTCG AGGCCGCCGC CGTCCTGGAC
GTGCCGGCTG CCGAGCAGCT GCTGGCCCGG GTCGCCGACC TGGAACCGGA GCAGGCCTCG
CGCGGCCTCA CCGAGGCGCT GGGCGTCGCG GTGCTGCAGG AGACCGACAC CGACCGCTAC
TTCTTCCGGC ACGTCCTGGC CCAGCGCGTC GCCTACGAGC AGATGCCCGG ACCGCTGCGG
GCCCGCCTGC ACCGGCGTGC CATCGCCGTG CTGGAGACCC GGTCCCCGCC GCCGCTGGTC
CAGATCGCCC ACCACAGCCA GCACCTCGGC GACCCGCAGG CCTGGCTGGA GCGCGCGGAG
GCGGCCGCGT GGCAGGCGAT CGGGCTCGGC GACTCCGGGA CCGCCGCGGC GCTGCTGCAC
CAGATCCTGG AGCAGCCCGG CGTGGCCGGG GACCGGCGCT CGCGCGCCGC CCTGGCGCTG
GGCGTCATCG CGGTCAACGG CGTCGACTAC GTCACCGACG CCCGCGCGCT GCGCCGCATC
CTGGCCGACC CGCAGCTGCC GATCGCGACC CGGGGCGAGA TCCGGCTCTC GCTCGGGCTG
CTGATGGTCA ACCACGCCGG GGACCGCGCC GGCTTCCGCG AGGTGCGACG CGCCGCCGAG
GAGCTCGCCG ACCGCCCCGA CCGCGCCGCG CGCGCGATGG TCGCGCTGGC GATGAACGAG
CGCGACGAGA ACGGCGTGCG GGCCTGGGAG TGGATGGAGC GCGCCGACGC CGAGGCGGCG
CGGTGCCCCG ACCCGGCCGT GAGCGCCGCG GCGCAGGCCA CCCGGCTCAC GCTGCTGGCC
CGGGAGGGGG ACCCCGGCGT GTGGGCGCTC ACCGACCAGC TGCCCCGCAC CAGCGCCGAC
GACGAGGTGA TGCGGCAGAG CGTCCGCGCC CTGTACAACA CCGGCGAGCT GGCGATCGAG
CTCGGGCACG ACCGGCGCGC CGCGCGCATG CTGCACGAGA GCCGCGACCT GGCCACCCGC
GTGAGCTTCC CGCGCATGGA GTGCTACAGC AGGATCGCGC TGCTGCGCCT CGACGCGCTG
GCCGGGGACT GGGAGGACGT CGAGAACCGC TTCACCGGGC TGTGCTCGGA ATACCCGGAC
ATCGCCATGG CCAAGACCGA CGAGGCGCTC ACCGTCGGGC AAGTGGCGGC GGCGCGCGGA
CTGCGAGCCC GCGCGGCGGA GCTGTTCACC GCCGCCGCGG CTTACGGCGA GATGGAGTCG
CAGGTCACCG CGGGGTTGCG CGCGGCGGCG GGGCTGATCG CCGTGCGCTT GGCCGCTGAC
GCCGAGCAGG ACGCGTGGGC GATCGCCGAG CCCGCGGTCG CGACGCTGCG GCGGGCCGGT
GCGTGGGCTC GGGGCAGCGG GCTGGTCCCG GCAGCCGTCG AGGCGGCGCT GGCGTGCGGG
TACCGGGACG CCGCCGAGCG GCTGGTCGCC GACGCCGAGG ACGGACTCCG GGACCGGGAC
GCTCCGGCAG CCACTGCCGA GCTGTGCCTG GCGCGCGGCT TGCTGAAGCG CGGGAGCGAC
GATGCCGCGG CCGCGGTGCG CGACTTCGAA TCCGCCCGGC AGCAGTGGTC CGACATCGGA
CGTCCTTACG AATCGGCCCA AGCTTGCGAG CGGCTCGGCG TCGCGCTCAG CGCCTCCGGC
GACGGCGAAG CGGCCGGCGT CCGGCTGACC GAGGCGCTCG CCGCCTACGA CCGCCTCGGC
GCCGCGCACG ATGCCGCGCG CTGCCGTCAC ACCCTGCGTG ACCTGGGCTT GGTCAAGGCC
GCCGGACGCG GACGGCGCGG CTACGGCGAC GAGCTGTCCC CGCGCGAACG CCAGGTCGCC
GAGCTGGTCG CCGGCGGCGC GACCAACCAC GACATCGCCG AGGCGCTGTT CCTGTCCCCG
CGCACCGTGG AGCAGCACGT CGCGCGGATG CTGCGGAAAC TGGGGACCAC CAGGGCCGGC
GTCGCGAGCG TTTTACGGGG CCGGGAACGC CAAAGGGGTT GA
 
Protein sequence
MAVPSRHAED HTETVAWSGA GFAFVGRERE LGLLLAGVRH PPAVVLVEGE AGIGKSRLVH 
EAAAAVAAAG RRVLTGLCHP LREPYPYGPV IDALRKAGDW LPPVADLPPS AGVLAPLLPD
LAARLPAAPR PAADAHAKRF QLVNGLRSFL AALGPAVLVV EDAHWIDEAT RELLLLLTRD
MPEQLSLVLT YRNEDLPPGG SVLGPAYRRQ PGVSGAAIHL NPLSGPDVQA LAHAALGPHA
TVELSTVLYQ RSEGLPLAAE EDLITLAERG PGEGPDPPGS LLDDLAHAEV PRGLREAFTE
RLSALSAAAR TVVEAAAVLD VPAAEQLLAR VADLEPEQAS RGLTEALGVA VLQETDTDRY
FFRHVLAQRV AYEQMPGPLR ARLHRRAIAV LETRSPPPLV QIAHHSQHLG DPQAWLERAE
AAAWQAIGLG DSGTAAALLH QILEQPGVAG DRRSRAALAL GVIAVNGVDY VTDARALRRI
LADPQLPIAT RGEIRLSLGL LMVNHAGDRA GFREVRRAAE ELADRPDRAA RAMVALAMNE
RDENGVRAWE WMERADAEAA RCPDPAVSAA AQATRLTLLA REGDPGVWAL TDQLPRTSAD
DEVMRQSVRA LYNTGELAIE LGHDRRAARM LHESRDLATR VSFPRMECYS RIALLRLDAL
AGDWEDVENR FTGLCSEYPD IAMAKTDEAL TVGQVAAARG LRARAAELFT AAAAYGEMES
QVTAGLRAAA GLIAVRLAAD AEQDAWAIAE PAVATLRRAG AWARGSGLVP AAVEAALACG
YRDAAERLVA DAEDGLRDRD APAATAELCL ARGLLKRGSD DAAAAVRDFE SARQQWSDIG
RPYESAQACE RLGVALSASG DGEAAGVRLT EALAAYDRLG AAHDAARCRH TLRDLGLVKA
AGRGRRGYGD ELSPRERQVA ELVAGGATNH DIAEALFLSP RTVEQHVARM LRKLGTTRAG
VASVLRGRER QRG