| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4685 |
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| Symbol | |
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| ID | 8336039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5337779 |
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| End bp | 5339995 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957785 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003115387 |
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| Protein GI | 256393823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGT CCCCACGAAC GCGTCCCCGC GGCCGGTCCT CAGGCCTGGT CGCACTGGTC
GCGGCGGGAG CGCTGGCGCT CGGCGCCATC GCTTTCAGCA CGTCTTTCAA TACCGCGTTC
GGCGCTCCGT CCGGCTCGGC CGCCGCCGCT GCCGCCGACG CGGCGTCCAA CGACGTGATC
GCGAACCTCT TCGAGTGGAA CTGGCCGTCG GTCGCCACCG AGTGCACGAC GGTCCTCGGG
CCGAAGGGCT ACGGCGCGGT GCAGGTCGCG CCGCCGCAGG ACTCGATCCG GCTGGCCGGG
TCCACCCACT CCTGGTGGGA CGTCTACCAG CCGGTCGGCT ATGACCTGAA CAGCCGGATG
GGCACCGAGG CGCAGTTCGC CTCGATGGTC TCGGCGTGCC ATGCCGCCGG GGTGAAGGTG
TACGCGGACA CCGTCATCAA CCACACGGCC GGGGCGAATC AGACCTCGAC CGATTCCTAC
GGCGGCGACT CTTTCAACCC GGCGACCTAC ACGTACGGCT CGATGGGCTA CACGAAGTCC
GACTTCCACT TCGACCCGCC GTGCCCGAAC TCCGACCTGA GCATCCAGGA CTGGAACAGC
GTCGCGCAGG TCCAGGAGTG CCAGCTGCTG TCGCTGTCGG ACCTGTACAC CGAGCAGGAT
TCCGTCCGCT CCACGCTGGC CGCCTACCTG AACAAGATGG AGGCCTACGG CGTCGACGGG
TTCCGGGTGG ACTCGGCCAA GCACATCGCG CAGGCCGACA TGGCCGCGAT CTTGAGCAAG
GTGAACAACA CCGCCGCCGG CGTGCGGCCG TACGTCATGC AGGAGGTCTA CCCCGGCAGT
AGCGGGCAGC TCGCACCGGC GGCGTTCGAG GGCAACGGCA ACGTGCTGGG CTTCGACTAC
GCCTACGGCA TCCGCAGCGC GTTCCTCGGC TCGATCACGA ACCTGCGGAC CTTCGGCCAG
GGCTTCGAGC CGTCCGGTTC CGACGCGGTC ATGGTCGCCA ACCACGACCT GGAGCGCAAC
GGGACGTCGC TGAGCTACAA GGACGGCGCG GCCTACACCC TGGCCACCGA GTTCGAGCTC
GCCTACGGCT GGGGCAGCAC CCCGTCGGTG TACTCAGGGT TCGACTTCAG CAACAGCGAC
CAGTCGCCGC CGGCGGACGC CAACGGATTC GTCACCAACA CCGTGTGCGG GACCGGGGCG
TGGGAATGCC TGGACCGGAA CCAGGGGGTC GCCAACCTGG TCGGGTTCCA CAACGCCACG
CGCGGGCAGG CGGTCGGGAA CTGGTGGACT GACAACAACA ACGCGATCGC GTTCTCACGC
GGGTCGGCGG GCTGGATCTC GGTGAACAAC GAGGGTTCGA CGGTCAGCTC CAGCTACCAG
ACCGGGCTGC CGGCGGGGAC GTACTGCGAT CTGGTGCATG GAAACTTCGC CAATGGCTCG
TGCACCGGGC CGACGGTAGT GGTCAGTGCC TCGGGGACGG CGACGGTGAG CACCGCGGCC
AAGGACGCGG TGGCGATCGA CGTCAATGCG GTGGTCGGGT CTTCGGGACC GCCGTCTTCG
TCCTCGTCCG CGCCTTCGAC GTCGCCGTCC ACCTCGCCTT CCACGTCGCC GTCCTCGTCC
GCGCCGCCCG CCGGACAGGT GGCCGAGACG TTCGCGGTGA CCGGAGCGCC GAGCACCGCA
CCGATCTACC TGGTCGGATC GCTGTCTGCG CTGGGCAGCT GGGCTCCGGC GTCGGCGATT
CCGCTGACGC AGCACGGCTC GCAGTGGTCG GGGACGGTCA CGCTGCCCGC GTCCACGGCG
TTCCAGTACA AGTACATCGC CAAGGACGCC GGCGGGAACG TCACCTGGGA GCAGGATCCG
AACCACAGCG CGACCACCGG CACTTCCGGC GCGACACTCA CCGACACCTG GCACGGCGCG
AGTTCGGCCG TGAGCGCCAC GTTCTCGGTG AACGCCACGA CGTGGGTCGG GCAGAACGTG
TATGTGGTCG GCTCGATACC GGCGCTGGGC AGCTGGAACC CCGCGAGCGC GATCGCGCTG
TCCTCGGCGG CCTATCCGGT GTGGCGCGGG ACGGTGACGC TGCCCCCGAA CACGGCGGTC
GAGTACAAGT ACATCAAGAA GGATCCGGAC GGCACGGTCG AGTGGGAGTC CGGCGCCAAC
CGGACGTACA CCTCACCGGC GTCGGGAGCC GTGACGTTGA GCGACAGCTG GAAGTAG
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| Protein sequence | MSSSPRTRPR GRSSGLVALV AAGALALGAI AFSTSFNTAF GAPSGSAAAA AADAASNDVI
ANLFEWNWPS VATECTTVLG PKGYGAVQVA PPQDSIRLAG STHSWWDVYQ PVGYDLNSRM
GTEAQFASMV SACHAAGVKV YADTVINHTA GANQTSTDSY GGDSFNPATY TYGSMGYTKS
DFHFDPPCPN SDLSIQDWNS VAQVQECQLL SLSDLYTEQD SVRSTLAAYL NKMEAYGVDG
FRVDSAKHIA QADMAAILSK VNNTAAGVRP YVMQEVYPGS SGQLAPAAFE GNGNVLGFDY
AYGIRSAFLG SITNLRTFGQ GFEPSGSDAV MVANHDLERN GTSLSYKDGA AYTLATEFEL
AYGWGSTPSV YSGFDFSNSD QSPPADANGF VTNTVCGTGA WECLDRNQGV ANLVGFHNAT
RGQAVGNWWT DNNNAIAFSR GSAGWISVNN EGSTVSSSYQ TGLPAGTYCD LVHGNFANGS
CTGPTVVVSA SGTATVSTAA KDAVAIDVNA VVGSSGPPSS SSSAPSTSPS TSPSTSPSSS
APPAGQVAET FAVTGAPSTA PIYLVGSLSA LGSWAPASAI PLTQHGSQWS GTVTLPASTA
FQYKYIAKDA GGNVTWEQDP NHSATTGTSG ATLTDTWHGA SSAVSATFSV NATTWVGQNV
YVVGSIPALG SWNPASAIAL SSAAYPVWRG TVTLPPNTAV EYKYIKKDPD GTVEWESGAN
RTYTSPASGA VTLSDSWK
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