Gene Caci_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4684 
Symbol 
ID8336038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5336552 
End bp5337517 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content72% 
IMG OID644957784 
ProductAcetyl xylan esterase 
Protein accessionYP_003115386 
Protein GI256393822 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3458] Acetyl esterase (deacetylase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.115957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCG TCGACATGAC CTTGAAGAAG CTCCGGGACT ATCTCCCGGC GCGCCCCGAG 
CCCACCGACT TCGACGCCTT CTGGGCCGCG ACGCTCGCCG AGGCCCGCAC GCACCCCCTC
GCCGCGCGCT TCGAGCCGGT GGAAAGCCGG CTGAGCACCG TCGAGGTCGA GGACGTCACC
TTCAGCGGCT TCGGCGGCCA GGCCGTCAAG GGCTGGCTGA CACGCCCGGC GAACGCCGCC
GGTCCGCTGC CGACCGTGGT CGAGTTCGTC GGCTACGGCG GCGGCCGCGG CCTGCCCCAC
GAGCGCCTGG TCTGGGCCAG CGCCGGCTAC GCGCACCTGA CGATGGACAC CCGCGGGCAG
GGCAGCGCCT GGCAGGTCGG CGACACCCCG GACGACGGAC CGTCCGGCAA CTCCCACCCC
GGCTTCGCCA CGCGCGGCGT CCTGGACCGC GACACGTACT ACTACCGCCG GCTGTACACC
GACGCCGTGC GCGCGCTGGA GGCCGCGCGG ACGCATCCGT CGGTGGACCC GGCGCGCGTC
CTGGTCGCCG GCGGCAGCCA GGGCGGCGGC ATCGCGATCG CCGCCGCCGG GCTGGTCGGC
GACCTCGCCG GCGTGGTCAC GGACGTGCCG TTCATGCAGC ACATCCGGCA CGCGACCGAG
ATCACCGACG GCTACCCGTA CAAGGAGATC GCAGAGTTCT GCAAGGTCCA CCGCGACAAG
GTGGAGCGCG TCTTCGACAC CATCTCCTAC GTCGACGGCG TGAACTTCGC CGCGCGCGCC
AACGCCCCGG CGCTGTATTC GGTGGCGCTG ATGGACGACG TGTGTCCGCC CTCGACGGTG
TTCGCTTCCT TCAACCACTA CGCCGGGCCG AAGGAGATCG AGGTGTATCC GTACAACGGG
CACGAAGGGG GCGGCGCCCA TCACGTCGCG CGCGCCCTGG AATTCGCGCA GTCGGTGGTC
GGCTAG
 
Protein sequence
MAFVDMTLKK LRDYLPARPE PTDFDAFWAA TLAEARTHPL AARFEPVESR LSTVEVEDVT 
FSGFGGQAVK GWLTRPANAA GPLPTVVEFV GYGGGRGLPH ERLVWASAGY AHLTMDTRGQ
GSAWQVGDTP DDGPSGNSHP GFATRGVLDR DTYYYRRLYT DAVRALEAAR THPSVDPARV
LVAGGSQGGG IAIAAAGLVG DLAGVVTDVP FMQHIRHATE ITDGYPYKEI AEFCKVHRDK
VERVFDTISY VDGVNFAARA NAPALYSVAL MDDVCPPSTV FASFNHYAGP KEIEVYPYNG
HEGGGAHHVA RALEFAQSVV G