| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4682 |
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| Symbol | |
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| ID | 8336036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5332083 |
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| End bp | 5333780 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957782 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003115384 |
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| Protein GI | 256393820 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00316141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTT CGAACGGCTT CTCCCGCCGC CAGGTGTTCA AGACCTCCGC GGCGATCGGC
GGAGCGATAG CCGCCGCTCC GCTGCTGTCC GCCTGCGGTT CCGGCAAGGC GGCGACCAAG
GCCAGCGGGG TCGCGCCCAA GTCCGCGGTG CAGGCGGTGC TGCCGACGTA CAAGCCGAGC
AGCGCGGTCA CCGCCGACAT CCCCTCGGTC ACCGGCGCGA ACGGCGCGGC CAGCGACCCG
GCGTTCCTGT CCTACCCGGC CAGCCCGCCG AAGTCGGTGA CCGGCGCGGT CGGCAACGGC
GGCTCGTACT CGGCGGTCTC GCCGATCTGG GGCTCGGTCC CGGCGCCGGG GAACAGCTAC
TACACGGCGG TGAACCAGGC TCTGGGCGCG ACGCTCACCG ACAGCCCGTC CGACGGCACC
ACCTTCGCCA CGATGCTGGC GACCCGCTTC GCCTCCGGCA ACATCCCGGA CTGGCTGGAC
GTGCCCGGCT GGAACGTCTC CTCGATTCAG AACTTCGCCG AGGGCGTCGA CAAGTTCTTC
AAGGACCTGA CGCCCTACCT CGGCGGCGAC AAGGTGCTGG ACTACCCGAA CCTCGCCGCG
ATCCCGACCG GCGGCTGGCA GGCCGCGGTG TGGAACGGCA AGCTGTACGG CATCCCGCTG
TGGACCTCGG CGGCCAGCAT CCCCGGCGCG ATGTTCTACC GCGCGGACAT CTTCAAGGCC
GCCGGCATCG ACGCCGCCTC GGTCACCACC GCCGACACCC TCAAGGCGGT CGGCAAGCAG
GTCACCGTCC CGGCGAAGGG CCAGTACGCC TTCGAGGACC TCAGCTCCTT CCTCTACCAG
CTGTTCAACG TCCCGGCGAA CAACGGGCGG ACCGGCTGGA AGCGCGACAG CACCGGCAAG
CTGGTCAACG GCTACGAGGT GCCGGAGTTC CTGGAGATGC TGAACTTCGC CAACGGCCTG
GCCAAGGGCG GCCTGATCCA CCCCGACGCG CTGGCCGGCG ACTCCTCGAA GGCCAAGAAC
CGCTTCTGGG CCGGCAAGAC CGTGATCACC GCCGACGGCA CCGGGGCGTG GAACAAGGGC
GACGCGCAAA GCGGCGTCGC GGCCAACCCC TCCTATGAGC GCCAGGCCTT CAAGATCTTC
GCCTACGACG GCGGCAAGGC GACGATGCCC CTGTATCCGG GCGCCGGGAT GTTCTCCTAC
CTGAACAAGA AGCTCTCCGA CGCGCAGGTC AAGGAGCTGC TGCGGATCGC CAACTACCTC
GCCGCGCCGT TCGGCAGCGC CGAGTACCTG GTGTCGCGGT ACGGCAAGGA AGGCGTGGAC
TACACGATGA CCAGCGGCGC GCCGATCCTC ACCGACCAGG GCAACAAGGA CGTCACCGAC
ACCCTGGACC AGCTGGCCAA CTGCCAGTCG GTGACGTTCA ACGCCGGCTA CAACCAGATC
ACCAAGGACT ACGCCGCCTG GCAGGGCGAC ATGGTGCAGC ACGCGTACAA GCCGCTGTTC
TACGCGATGA ACATCAGCGA GCCGGCGCAG ACCGCGAAGG CGAGCACGGC GCTGGAGGCG
GTCATCACCG ACGTGCGCAT GGGCCGCAAG AGCGTGGCGG ACTTCCAGTC GGCGCTGAGC
ACTTGGCAGA ACGCCGGCGG CAACCAGCTG CGGGACTTCT ACGACGGCAT CGCCAAGCAG
TACGGCACGG GGAACTGA
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| Protein sequence | MTSSNGFSRR QVFKTSAAIG GAIAAAPLLS ACGSGKAATK ASGVAPKSAV QAVLPTYKPS
SAVTADIPSV TGANGAASDP AFLSYPASPP KSVTGAVGNG GSYSAVSPIW GSVPAPGNSY
YTAVNQALGA TLTDSPSDGT TFATMLATRF ASGNIPDWLD VPGWNVSSIQ NFAEGVDKFF
KDLTPYLGGD KVLDYPNLAA IPTGGWQAAV WNGKLYGIPL WTSAASIPGA MFYRADIFKA
AGIDAASVTT ADTLKAVGKQ VTVPAKGQYA FEDLSSFLYQ LFNVPANNGR TGWKRDSTGK
LVNGYEVPEF LEMLNFANGL AKGGLIHPDA LAGDSSKAKN RFWAGKTVIT ADGTGAWNKG
DAQSGVAANP SYERQAFKIF AYDGGKATMP LYPGAGMFSY LNKKLSDAQV KELLRIANYL
AAPFGSAEYL VSRYGKEGVD YTMTSGAPIL TDQGNKDVTD TLDQLANCQS VTFNAGYNQI
TKDYAAWQGD MVQHAYKPLF YAMNISEPAQ TAKASTALEA VITDVRMGRK SVADFQSALS
TWQNAGGNQL RDFYDGIAKQ YGTGN
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