| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4667 |
|---|
| Symbol | |
|---|
| ID | 8336021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5316273 |
|---|
| End bp | 5317004 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644957767 |
|---|
| Product | deoxyribose-phosphate aldolase |
|---|
| Protein accession | YP_003115369 |
|---|
| Protein GI | 256393805 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.570938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.995348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGG CCTCGATAGA CGTCCCACGC TGGACCGGCC CGCTCCCCAC CCGCGACGAG
GTGGCGAAGA TGATCGACCA CTCCCTCCTG CGCCCCGAAC TCACCCCCGC CGACATCCAG
GCAGGCCTGC TCATAGCGCG CGAGCACAAC GTGGCCTCCG TGTGCGTACG CCCCGCCGAC
GTCGCCGCGG TGGTGTCTGG CGGCGTACTG CACGGCACGA CGGTCGCCAT CGGCACGGTC
GTCGCCTTCC CCCACGGCAG CAGCACCACG GCGACGAAGG TCTTCGAGAC CGCCGAGCTC
GTCGCCCAGG GCGCCGAGGA GATCGACATG GTCATCGACA TCGGTCGCCT GCGCGCTGGC
GACACCGCCT TCACGCGGGA CGAGATCGCT GCAGTAGTGC AGGCGGCGGC AGGTCGCCCG
GTGAAGGTCA TCTTCGAGAA CACATACCTG ACCCAGCAGG AGAAGGTCGC GGGCTATCAG
GCGGCTGAGG CGGCCGGCGC GGCGTTCGTC AAAACCAGCA CAGGCTTCGC CGCTGGGGGA
GCGACAGCCG CCGATATCGC CCTGATGCGC CAGACCGTCT CGGCCGCGGT ACAGGTCAAG
GCCGCAGGCG GCGTGCGCAC ACTGGACGCC CTGCTGGAAC TGAACCGTCT GGGAGCCACC
CGCTTCGGCG CGACAGCCAC CGCGACAATC CTCGACGACC TGGAAGAGCG TCGGCGCACC
TCGACTATCT AA
|
|---|
| Protein sequence | MSVASIDVPR WTGPLPTRDE VAKMIDHSLL RPELTPADIQ AGLLIAREHN VASVCVRPAD
VAAVVSGGVL HGTTVAIGTV VAFPHGSSTT ATKVFETAEL VAQGAEEIDM VIDIGRLRAG
DTAFTRDEIA AVVQAAAGRP VKVIFENTYL TQQEKVAGYQ AAEAAGAAFV KTSTGFAAGG
ATAADIALMR QTVSAAVQVK AAGGVRTLDA LLELNRLGAT RFGATATATI LDDLEERRRT
STI
|
|---|
| |