Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4664 |
Symbol | |
ID | 8336018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5311245 |
End bp | 5312171 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957764 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003115366 |
Protein GI | 256393802 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.200803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC CCACTCACCA CACAGCTCCG ACCGCCGACG TCATCGTCGT CACCGGCGCC TCCTCCGGCT TCGGAAACCT CGCAGCACGC GCCCTGGCCC GCGCCGGACA CACCGTCTAC GCCGGAATGC GCGCCACCGA CGGACGCAAC GCGGCGCGCG TCGCCGAACT GGCACAGCTG TCCGCCGACG AAGGCCTCGA CGTACGCGGC ATCGAGATGG ACGTCCAAGA CCAGGCATCC GTCGACGCCG CCATCGCCCG CATCGCCGAG GAACAAGGCC GACTGGACGT CGTCGTGCAC AACGCCGGAC ACATGGTGCT CGGACCCGCC GAAGCGTTCA CCCCCGAACA ACTCGCCGAG CTGTACGACA TCAACGTGCT CAGCACCCAG CGCGTCAACC GCGCCGCACT GCCGCTGATG CGCCGCGCCG GCTCCGGACT GCTGGTATGG GTCGCCAGCT CCAGCACCCG CGGCGGACAC CCGCCGTTCC TGGCACCGTA CTTCGCCGCC AAAGCCGGCA TGGACGCACT CGCCGAAAGC TACGCCGCCG AAGTCATCCG CTACGGCATC GACACCGTCA TCATCGTCCC CGGCGCCTAC CCCAGCGGCA CCAACCACTT CGCCCACGCC GGCCAGCCCG CCGACCCCGA CCGCGCCGCC GAATACGACG CCGCCTACGG CGAACTGCGC GACCAGATGG CCGACCGCCT CACCGCCCTT TTCCCCGCCG GCCGCACCGT CGACGAAGTC GCCGACGCCA TCGTCGAGGC CGTAGCCCTC CCCGCCGGAC AACGGCCCTT CCGCATCCAC ATCGACCCCA GCCGCGACGG CAGCGACGTG GTGTCCACCG TCAGCGACCG CATCCGCGCC GAGTTCTACC ACCGCATCGG CATCGCCGAC CTGCTCACCG ACCACGCCAG CCGCTGA
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Protein sequence | MSQPTHHTAP TADVIVVTGA SSGFGNLAAR ALARAGHTVY AGMRATDGRN AARVAELAQL SADEGLDVRG IEMDVQDQAS VDAAIARIAE EQGRLDVVVH NAGHMVLGPA EAFTPEQLAE LYDINVLSTQ RVNRAALPLM RRAGSGLLVW VASSSTRGGH PPFLAPYFAA KAGMDALAES YAAEVIRYGI DTVIIVPGAY PSGTNHFAHA GQPADPDRAA EYDAAYGELR DQMADRLTAL FPAGRTVDEV ADAIVEAVAL PAGQRPFRIH IDPSRDGSDV VSTVSDRIRA EFYHRIGIAD LLTDHASR
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