Gene Caci_4664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4664 
Symbol 
ID8336018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5311245 
End bp5312171 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID644957764 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003115366 
Protein GI256393802 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.200803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CCACTCACCA CACAGCTCCG ACCGCCGACG TCATCGTCGT CACCGGCGCC 
TCCTCCGGCT TCGGAAACCT CGCAGCACGC GCCCTGGCCC GCGCCGGACA CACCGTCTAC
GCCGGAATGC GCGCCACCGA CGGACGCAAC GCGGCGCGCG TCGCCGAACT GGCACAGCTG
TCCGCCGACG AAGGCCTCGA CGTACGCGGC ATCGAGATGG ACGTCCAAGA CCAGGCATCC
GTCGACGCCG CCATCGCCCG CATCGCCGAG GAACAAGGCC GACTGGACGT CGTCGTGCAC
AACGCCGGAC ACATGGTGCT CGGACCCGCC GAAGCGTTCA CCCCCGAACA ACTCGCCGAG
CTGTACGACA TCAACGTGCT CAGCACCCAG CGCGTCAACC GCGCCGCACT GCCGCTGATG
CGCCGCGCCG GCTCCGGACT GCTGGTATGG GTCGCCAGCT CCAGCACCCG CGGCGGACAC
CCGCCGTTCC TGGCACCGTA CTTCGCCGCC AAAGCCGGCA TGGACGCACT CGCCGAAAGC
TACGCCGCCG AAGTCATCCG CTACGGCATC GACACCGTCA TCATCGTCCC CGGCGCCTAC
CCCAGCGGCA CCAACCACTT CGCCCACGCC GGCCAGCCCG CCGACCCCGA CCGCGCCGCC
GAATACGACG CCGCCTACGG CGAACTGCGC GACCAGATGG CCGACCGCCT CACCGCCCTT
TTCCCCGCCG GCCGCACCGT CGACGAAGTC GCCGACGCCA TCGTCGAGGC CGTAGCCCTC
CCCGCCGGAC AACGGCCCTT CCGCATCCAC ATCGACCCCA GCCGCGACGG CAGCGACGTG
GTGTCCACCG TCAGCGACCG CATCCGCGCC GAGTTCTACC ACCGCATCGG CATCGCCGAC
CTGCTCACCG ACCACGCCAG CCGCTGA
 
Protein sequence
MSQPTHHTAP TADVIVVTGA SSGFGNLAAR ALARAGHTVY AGMRATDGRN AARVAELAQL 
SADEGLDVRG IEMDVQDQAS VDAAIARIAE EQGRLDVVVH NAGHMVLGPA EAFTPEQLAE
LYDINVLSTQ RVNRAALPLM RRAGSGLLVW VASSSTRGGH PPFLAPYFAA KAGMDALAES
YAAEVIRYGI DTVIIVPGAY PSGTNHFAHA GQPADPDRAA EYDAAYGELR DQMADRLTAL
FPAGRTVDEV ADAIVEAVAL PAGQRPFRIH IDPSRDGSDV VSTVSDRIRA EFYHRIGIAD
LLTDHASR