Gene Caci_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4663 
Symbol 
ID8336017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5310448 
End bp5311194 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID644957763 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003115365 
Protein GI256393801 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.273887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCACACCAAA CCCTCGCGTC GCCATCGTCA CCGGCGCCTC ACGCGGCATC 
GGCCGCGCCG TCGCCGGACA GCTCGCCGCC GACGGATACA GCGTCGTCCT GGGCTACGCC
GGCCGCGCCG ACCTCGCCGA ACAAGCCGTC GCCGAGATCC AAGCCGCCGG CGGACACGCC
AGCGCCATCC AGGCCGACGT CGCCGACGAA ACCGCCGTCG CCGCCATGTT CGACCACGCC
GAGCAGCAGT ACGGCGGCAT CGACGCCGTC GTCAACGCCG CCGGACAGAT GAAACTGTCC
ACCGTCGCCG ACCTCGACCT GAACGACCTC GACGCCATGC ACCGCACCAA CATCCGCGGC
GCCTTCGTCG TCGCCCAGCA AGCCGCACGC CGCCTGCGCC CCGGCGGCGC CCTGGTCATG
TTCTCCACCT CGGTGATGGG CACCAAATTC CCCACCTACG CCGGATACAC CGCCAGCAAA
GGCGCCGTGG AGGCCATGAC CCTCATCCTG GCCCGCGAAC TGCGCGGACG AGACGTCACC
GTCAACGCCG TCGCCCCCGG ACCCACCGCC ACCGACATGT TCCTCGACGG CAAGGACGAG
CAGCTCATCG CCAACCTCGC CGCCCAGAAC CCGCTCGAGC GGCTCGGCAA GCCCGAAGAC
ATCGCCCACG TCGTGGCGTT CCTGACCAGC GCGGAAGGCC ACTGGGTCAA CGGACAGGTG
CTGCGCGCCA ACGGCGGAAT GGTCTGA
 
Protein sequence
MTTTTPNPRV AIVTGASRGI GRAVAGQLAA DGYSVVLGYA GRADLAEQAV AEIQAAGGHA 
SAIQADVADE TAVAAMFDHA EQQYGGIDAV VNAAGQMKLS TVADLDLNDL DAMHRTNIRG
AFVVAQQAAR RLRPGGALVM FSTSVMGTKF PTYAGYTASK GAVEAMTLIL ARELRGRDVT
VNAVAPGPTA TDMFLDGKDE QLIANLAAQN PLERLGKPED IAHVVAFLTS AEGHWVNGQV
LRANGGMV