| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4662 |
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| Symbol | |
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| ID | 8336016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5309445 |
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| End bp | 5310308 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957762 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003115364 |
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| Protein GI | 256393800 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.232766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTGT CTGAACTCGG TGGCTTTCTG AAATCCCGGC GCGACCGGAT CCGTCCGCGT
GATGTCGGGT TGCCGACCGG GCCGCGGCGG CGGGTCCCTG GGCTGCGGCG CGATGAGGTG
GCGCAGCTGG CGGGGGCGTC GGTCGACTAC TACATCGAGT TGGAGCGCGG GGGTGCGCAG
CCTTCGGAGC AGATGTTGGC GGCGATCGCG CGGGCGTTGC GGTTGTCCCG GGATGAGCGG
GATCACCTGT ATCAGCTGGC GGGGCGTCCG GTTCCGCCGG CCGGCGGGGG TGCGGCGCAT
GTGAGTCCGG GGATGTTGGA TCTGCTGGAC CGTTTGGTCG GCACGCCGGC GCGGGTGATC
ACCGACATGC ATGTGGTGTT GGTGCAGAAC CGGCTGGCTG AGGCGTTGTT GGGTCCGGCG
CCGTCGGGGG TGGGGGTGCG TGCCGGGTTC GTGTACCGGT GGTTCACCGA TCCGTCTGCT
CGTGCGCTGT ATCCGCCGGA GGATCACGCG CGGCACGCTG AGACGTTCGT GGCGGATCTG
CGGGCGGCGG TGGCGCGGCG CGGCAAGGGT GATGAGGACG CCAACGGCAT GGTCGCCGAG
CTGCTGCGGG ACAGTCCGGA GTTCGCGGCG TTGTGGAGTC GGCACGATGT GGCGGTGCGC
CGGATGGACA CCAAGCGCAT CGTGCATCCG GCGCTGGGGG TCATCGACGT CAACTGTCTG
AATCTGCTCA CTGAGGACGG CAGTCAGCGG CTGTTGTGGT TCAGTCCGGT GCCTGGTACC
GACGCGATGG AGAAGCTGGA GTTGTTGTCG GTTCTCGGTA CGCAAGATCT CGCCGCCGAG
CCGGGCCAAA GGGCGCCGCG GTGA
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| Protein sequence | MDLSELGGFL KSRRDRIRPR DVGLPTGPRR RVPGLRRDEV AQLAGASVDY YIELERGGAQ
PSEQMLAAIA RALRLSRDER DHLYQLAGRP VPPAGGGAAH VSPGMLDLLD RLVGTPARVI
TDMHVVLVQN RLAEALLGPA PSGVGVRAGF VYRWFTDPSA RALYPPEDHA RHAETFVADL
RAAVARRGKG DEDANGMVAE LLRDSPEFAA LWSRHDVAVR RMDTKRIVHP ALGVIDVNCL
NLLTEDGSQR LLWFSPVPGT DAMEKLELLS VLGTQDLAAE PGQRAPR
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