Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4660 |
Symbol | |
ID | 8336014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5306155 |
End bp | 5306940 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957760 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003115362 |
Protein GI | 256393798 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.268545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGA ACACCGTGAA CACCATTTCA GGCCCGCTGA CCGGTCGCGT CGCCGTCATC ACCGGAGCCT CCAGCGGCAT CGGCGAGGCC ACCGCGCTGG AGCTGGCCGC ACTCGGGGCG CGCGTGGTCG TACTGGCCCG CCGTGCCGAA CGGCTCGCAG ACCTGGTCGC CCGCATCGAA AAAGATGGCG GCACGGCGCT GGCCATCGCC GCCGACGTCA CCGACCCGGC CGGGCTGCAG GCCGCCGCGG CGCGGGTTCA GCGCGAGTTC GGCGGCGCGG ACCTGGTGAT GAACAACGCC GGGGTGATGC TGCCGGCGCC GGTCGAGGAG CTGGCCACCG ACCAGTGGCA GCACCAGATC GACCTGAACA TCAGCGGTGT GATGAACGTG ATCGCCGCGT TCACCCCGCA GCTGGTGGCC TCCGCCGCCC AGCGGGGCGT GGCGGACCTG ATCAACACCT CCTCGATCGC GGCACAGAAC ATCTTCCCCG GCTTCGCCGT CTACTGCGGC ACCAAGGCCT ACGTCACGCA CCTGTCGCGG CAGCTGCGCG CGGAGTTGGG CGCCAAGAAG GTGCGGGTCG CGGCGATCGA GCCGGGCATC GTCGGCACGG AGCTCCAGTC CCACGTCACC GACGCCGGCG CCCTGCAGTG GCTGGCCGGG GCGAAGGAGG CGATGGAATT CCTGACACCG GCCGACGTCG CCCAGACCGT CGGCTTCCTG GCCGCTCTGC CGCCGCGGGT CAACCTGCAG CAGGTCACGA TCATGCCGAC AGGCCAGCCG AGCTGA
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Protein sequence | MSTNTVNTIS GPLTGRVAVI TGASSGIGEA TALELAALGA RVVVLARRAE RLADLVARIE KDGGTALAIA ADVTDPAGLQ AAAARVQREF GGADLVMNNA GVMLPAPVEE LATDQWQHQI DLNISGVMNV IAAFTPQLVA SAAQRGVADL INTSSIAAQN IFPGFAVYCG TKAYVTHLSR QLRAELGAKK VRVAAIEPGI VGTELQSHVT DAGALQWLAG AKEAMEFLTP ADVAQTVGFL AALPPRVNLQ QVTIMPTGQP S
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