Gene Caci_4652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4652 
Symbol 
ID8336006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5292901 
End bp5294169 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content74% 
IMG OID644957752 
ProductROK family protein 
Protein accessionYP_003115354 
Protein GI256393790 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTCGA CTGCCGGCGA CACGCAGGCC GCGCCCCAAA CCCCGATCAA CCTGCACAAC 
CTGGGGCGGG TCCGCATCCT GCAAGCCCTC ACCAGCCACG CCCGGCTCTC CCGCGCCGAC
CTGGTGCGGC ACACCGGACT GGCCCGCACC ACCGTCAGCT CCGTCATCTT CGACCTGATC
TCCGCGGGCC TGGTCCGCGA GAGTCCCGAC GTCCGCGAGA ATTCCGACAC CGCCGCCGCC
GCCGCCGCCG GCGCCGCGCC CGGCCAGCGC ACCGGCCGCC CGCCGCTCCT GCTGCGCCTG
GAACCGGAGG CCGCCTACGC CGTCGGCCTG GACGTCGGCC ACGATCACGT CCGCGCCATT
GTGACCGATG TCGTCGGAAC GCCCCGCTGG GACCGCACCG AGGCCCTGGC CGTCGACGAC
GACCCGCGGC GCGCGCTGGA CACCGCCGTG CGCCTCATCG CCGAAGCCGT CAAGGACACC
GCGGTCCCGC CACACAAGAT CCTCGGGCTG GGGTTGGGCA TCGCCTGCCC CGTGGACAAA
ACCACCGGCG GCTTGCACGC CGAGGGCATC ATGCCCGGCT GGGTCGGCAC CCGGCCCGCC
GACGACCTGG CAGAGCGCAC CGGACTGCCG ACGCAGATCA TCAACGACGC CAACGCCGGC
GTCCTGGCAG AGCGCCGCTT CGGCGCCGCG CGGGAGGCCA CCAACGTCGT CTACGTCCGC
CTCGCCGCCG GTATCGGCGC CGGCATGATG AGCGAAGGCC GCATGCTCCT GGGCCACCAC
GGCCTCGCCG GCGAGCTCGG GCATGTGATG GTCGAGCTGA ACGGCGCGGT GTGCCGCTGC
GGCAGCCGCG GCTGTTTGGA AACCGTCGCC AGCCCCGCGG CGATCGCCGG GTTGTTGGCG
CGCAGCTGGG GACAGCCGGC CGACAGCATC GACCTGCCGG AGCTGCTGCG CCGAGGCGAC
CGCGGCGCGC TGCGCGTTGT CGAGGACGCC GGGGAAGCGG TCGGCCGCGC CCTGTCCGCG
GCGGTACAGC TGCTCAACCC GCAGCTGGTC GTCATCGGCG GCGATCTGGC CGAGGCCGGT
GAGGCGCTGC TGGAGCCGAT CCGCAGGACT CTGCGCCGCG GCACCATGGG ATCGCTGAAT
CAGCGGCTGC GGATCGTGCC GAGCACCCTC GGCGACAGCG CGGGCGTACG CGGCGCGGCA
GCGCTGGTGC TGGACAGCGT GCCGCAGCGC CTCGCGCTGG ACCTCCCGGC TCGCGGGGAT
CTCAGGTAG
 
Protein sequence
MHSTAGDTQA APQTPINLHN LGRVRILQAL TSHARLSRAD LVRHTGLART TVSSVIFDLI 
SAGLVRESPD VRENSDTAAA AAAGAAPGQR TGRPPLLLRL EPEAAYAVGL DVGHDHVRAI
VTDVVGTPRW DRTEALAVDD DPRRALDTAV RLIAEAVKDT AVPPHKILGL GLGIACPVDK
TTGGLHAEGI MPGWVGTRPA DDLAERTGLP TQIINDANAG VLAERRFGAA REATNVVYVR
LAAGIGAGMM SEGRMLLGHH GLAGELGHVM VELNGAVCRC GSRGCLETVA SPAAIAGLLA
RSWGQPADSI DLPELLRRGD RGALRVVEDA GEAVGRALSA AVQLLNPQLV VIGGDLAEAG
EALLEPIRRT LRRGTMGSLN QRLRIVPSTL GDSAGVRGAA ALVLDSVPQR LALDLPARGD
LR