| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4628 |
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| Symbol | |
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| ID | 8335982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5265534 |
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| End bp | 5266781 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957728 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003115330 |
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| Protein GI | 256393766 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0147966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG TGCACCCCGA CGCCGACCAT CCCCGCGACG AGCAGAACGT CTCCGCTCCT
GGCGCCTCCG ACGCCCCGAC CGATGCCCCG ACTGATGCCC CCTCCGCCGA CGATCCTTCC
ACGGCCGGGC CGCTGGCCGG ACTGCTCGTC ATCGACCTGA CGCGGGTGCT GGCCGGACCG
TTCGCCACGA TGATCATGGC CGACCTCGGC GCCCGAGTGA TCAAGGTCGA GCATCCGGCG
ACCGGCGACG ACTCCCGCCG CTACGGCCCG TTCGCCGCCG ACGGCCGCTC CATGTACTTC
GCCCGCGTCA ACCGCGGCAA GCAGTCCCTC GCCGTCGACC TGAAGAAGCA CCCCGAACAG
GTCGCCGCGC TCGCGGCGCG CGCCGACGTG CTGGTGGAGA ACTTCCGGCC CGGGGTGATG
GACCGCCTCG GGCTCGGCGC GCAGGCGCTG CGGGCCCGCA ACCCGCGGCT GGTGTACGCC
TCGGTGTCCG GGTACGGCGC GACCGGTCCG CGCTCCGGCG AGCCCGCGTA CGACGCGGTC
ATCCAGGCTC GCAGCGGCCT GATGTCGGTG ACCGGGGAGC CGGAGGGTCC GCCGGTGAAG
TCCGGCGCGT CGGTCTCGGA CCTGTCCGCC GGCGTCTACA CCTTCGGGGC GGTGATGGCC
GCCCTGGTGG GCCGCGGCAT CCACGGCCGC GGCACACACA TCGACATCGC GATGTTCGAC
GCGACGGTGT CGTTCCTGGA AGGCAACGCC CTGGCGTGGC TGGCCGATCG CACCGTGCCG
AACCGTATCG GCTCACACCA TCCGAACATC GCGCCGTTCG GCGCTTTCGC CGCCGCCGAC
GGGCAGATCG TGGTGTGCGT CGGCAACGAC GCGCTGTTCG TGTCCTTCGC CGCCGCGCTC
GGCGCCCCGG AGCTGGCGCA GAACCCGCAG TTCGCGCAGA ACGCGAACCG CTCGGCGAAC
CGCCTGCTGC TCACGGCCGT CATCGAGGAA CTGCTGGCCG CCGACACCTG CGCGAACTGG
CTGGCGCGGC TGGAGGCGGC GAAGGTGCCG TGCGCGCCGG TGAACGACAT CGGGCAGGCG
ATGACCGACG TGCAGACCCA GGCCCGCCGC ATGCGGATCA CCGCCGGCGG CCTGGAGCTG
CCGGGCCAGG TGGTGAAGAT GGCCGGCTAC CCCGACCCGG TGGAGCGGCC GGCAGCGCCG
GAGCTGGACG AGCACGGCGC GGCGATCCGG GCCGAGTTCG GGTTCTGA
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| Protein sequence | MTAVHPDADH PRDEQNVSAP GASDAPTDAP TDAPSADDPS TAGPLAGLLV IDLTRVLAGP
FATMIMADLG ARVIKVEHPA TGDDSRRYGP FAADGRSMYF ARVNRGKQSL AVDLKKHPEQ
VAALAARADV LVENFRPGVM DRLGLGAQAL RARNPRLVYA SVSGYGATGP RSGEPAYDAV
IQARSGLMSV TGEPEGPPVK SGASVSDLSA GVYTFGAVMA ALVGRGIHGR GTHIDIAMFD
ATVSFLEGNA LAWLADRTVP NRIGSHHPNI APFGAFAAAD GQIVVCVGND ALFVSFAAAL
GAPELAQNPQ FAQNANRSAN RLLLTAVIEE LLAADTCANW LARLEAAKVP CAPVNDIGQA
MTDVQTQARR MRITAGGLEL PGQVVKMAGY PDPVERPAAP ELDEHGAAIR AEFGF
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