Gene Caci_4618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4618 
Symbol 
ID8335972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5255843 
End bp5256499 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID644957718 
ProductCaffeoyl-CoA O-methyltransferase 
Protein accessionYP_003115320 
Protein GI256393756 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.5454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000409196 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGAG GCTCGATCAA CCTGGACGGC GCGCTCCAGG ACTACGTCGT GGACCACACC 
ACCGCCCTGG ATGAGGTGCA AAGAGCTCTG ATCGCCCGCA CCACCGAGCT GGGCTCGCCG
TCCGGGATGC AAATCGGCGC CGAGCAGGCG CAGCTGCTCA CCTTGCTGGT GCGGCTCACC
AACGCCAAGC ACGCGGTCGA AGTGGGGACG TTCACCGGTT TCTCCGCCAT CGCCATCGCA
CGCGGACTCG CCCCCGGCGG CAAGCTGCTG TGCTGCGACG TCAGCGAGGA ATGGACGAGC
ATCGGGCGCG CGGCGTGGCA GCAGGCGGGC CTGGCCGACC GGATCGAGCT GCGGCTGGCG
CCGGCCGCCG AAACCCTGGC GGCGCTGCCG GAGCAGGAGT ACATCGACTT CGCGTTCATC
GACGCCGACA AACCCTCGTA CTGGACGTAC TACAGCGAAC TCGTGCCGCG CATGCGCGCC
GGGGGAGTGA TCGCGGTGGA CAACGTGCTG TGGAGCGGAC GCGTCGTGCA GGACGAGCCG
GAGGAGGAGT CCACCCGGCT GCTGAAGGAG TTCAACGACA AGGTCGTGCG CGACGAACGC
GTCGACGTCG TGATGCTGCC GGTCGGCGAC GGCGTTTCTT TGATGTACAA GCGGTAG
 
Protein sequence
MTRGSINLDG ALQDYVVDHT TALDEVQRAL IARTTELGSP SGMQIGAEQA QLLTLLVRLT 
NAKHAVEVGT FTGFSAIAIA RGLAPGGKLL CCDVSEEWTS IGRAAWQQAG LADRIELRLA
PAAETLAALP EQEYIDFAFI DADKPSYWTY YSELVPRMRA GGVIAVDNVL WSGRVVQDEP
EEESTRLLKE FNDKVVRDER VDVVMLPVGD GVSLMYKR