Gene Caci_4614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4614 
Symbol 
ID8335968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5250967 
End bp5252052 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content75% 
IMG OID644957714 
Producthypothetical protein 
Protein accessionYP_003115316 
Protein GI256393752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000226989 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCACGA TCGCTGCGGT GCCGCACACC GGACTGGGCA TGGCGGCCTC ACGGCTGTCG 
CAGACCGGAC GGCCGGCACG CGTGACCGAG GCGCTGTACT GCCCGCCGGC AGTACGCGAC
GACCCAGGCC TGGCCGAGAC GGTGCAGCAG CGCCTCGACG CCTGGGCCGC CGGCGTCGGG
CTGGCACCGG GCCCGGCTGC CGGACTCGGA CGGCTGGCGG TGCTGGCGCA TCCGGACACC
GACGATGCGG GCCGCCTGGA GGTGGCGGCG CGGCTGCTGG CGGTCGGACG GGTGCTGGCC
GCTGGGGCGA TGGGAGCTTC GGAGGCGGAT CTGCTGCGGC GCGCGCCGGA GCGCTCCGGG
GCGCCGCAGG ACTCCCCCGC TGCTGCTGCT TCGGCTGCTG CTGCGTCGCC GGCCGGTGCT
GTCGGCGAGG CGCTCGCGCA GATCTACGAC GGCTGCGACG TCCCCGATGA CGCCCTGCCT
TCCCACCTGG ACCTGGCCGA TCCGGCGCGC GCCGGTCTCG CCGGTGTCGC CGCCCCGGCG
CTGCTGTCGG CGATGGCCGG GCTCGGCGGA TTGCCGGCTT CGCCGTATCA GGTCGCGCGG
GTGCGGGCCG AATGCGAGGC GTTGTCTGCG GCGGCGCCTA CGGCTACCGT CTCCGGTCCG
CGTCCGCCGT GGGAGTACCT GTCGCTGGGG CACGTCAACG CCTACAGCCC GGCGTTGGCG
GCGCTGGACG CGGTCGACGG GTACGAGTTG TCGCCGTCGT CCTCAGGCGA TCCGGAGCTG
CGGCGCGCGC AGCGGCTGGC GGCGTTGGCG GCGGCGTTGC TGCACGACAT CGCCTCGCCG
GCACCGTCGG GTCTGACTGC GGCGATCGCG CGCGCCGAGG GTCTTACCGC AGGCGCTGCG
GGGCGGCGTG CCGCGCAGGT CCACGACGAG GCGATGCGGG CGTTCCAGCA TCACGCCACA
CAGCTGGCCG GCTCGGCCGA TCCTTCCACT CGCCGATATC TGGCGGGCCT GTGGACGTGG
CTCGGCGGAC ACCGCACCTG GCACGCGGTC TGCGAACACG CCGTCGCCGA GCACCCCGCG
CCCTGA
 
Protein sequence
MGTIAAVPHT GLGMAASRLS QTGRPARVTE ALYCPPAVRD DPGLAETVQQ RLDAWAAGVG 
LAPGPAAGLG RLAVLAHPDT DDAGRLEVAA RLLAVGRVLA AGAMGASEAD LLRRAPERSG
APQDSPAAAA SAAAASPAGA VGEALAQIYD GCDVPDDALP SHLDLADPAR AGLAGVAAPA
LLSAMAGLGG LPASPYQVAR VRAECEALSA AAPTATVSGP RPPWEYLSLG HVNAYSPALA
ALDAVDGYEL SPSSSGDPEL RRAQRLAALA AALLHDIASP APSGLTAAIA RAEGLTAGAA
GRRAAQVHDE AMRAFQHHAT QLAGSADPST RRYLAGLWTW LGGHRTWHAV CEHAVAEHPA
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