| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4602 |
|---|
| Symbol | |
|---|
| ID | 8335956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5234111 |
|---|
| End bp | 5238124 |
|---|
| Gene Length | 4014 bp |
|---|
| Protein Length | 1337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644957703 |
|---|
| Product | non-ribosomal peptide synthetase |
|---|
| Protein accession | YP_003115305 |
|---|
| Protein GI | 256393741 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR02353] non-ribosomal peptide synthetase terminal domain of unknown function |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.381211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000116463 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGC CGGTGTCCGG TCTGGACGCC CTTGCGGTGT ATGACGCGTC GGCGTTGGCA
CCCGCTCCTC GAACGCTCAT CGACATCCTG CACGCGACCG CGCGTGCGCA CCCTGACGCC
ACCGCGCTGG ACGACGGCCG CCGGGCCTTG GACTACTCCG CGCTGCTCGT GGAGGCCTCG
GCGATGGCCG CTCGGCTGGG CCGGGCGGGT GTCGGTGCCG GGGACCGGGT CGGGGTGCGG
GTCCCGTCGG GGACCGTCGA TCTCTACATC GCGATTCTCG GGGTGCTGAC AGCCGGCGCC
GCGTACGTGC CGGTGGACGC CGACGACCCG GACGAGCGTG CGCAGCTGGT GTTCGGCGAG
GCCGGGGTGC GTGCGGTGAT CGGCGAAGGT CTGCGCATCG CGGCCGAGCC GGCCGAGCCG
GCCGAGCCGG CCGAGCCGGC CGAGCCGGCC GAGCCGGCCG AGCCGGCCGA GCCGGCCGAG
CCGGCCGAGC CGGCCGAGCC GGTCCAGCCG GTCCAGCCGG CCGAGCGAAC CCAGCCGGTC
GAACAAGCTG AGCACGCCGC AGCCGCTCCC GCGTCCCGCC GCCCCCCAAC CCTCACCGAC
GACGCCTGGA TCATCTTCAC CTCCGGCTCG ACCGGCAAGC CGAAGGGCGT GGCCGTATCG
CACCGCAACG CCGCGGCGTT CGTGGACGCC GAGGCCGGCC TGTTCCTGCG CCAGGCGCCG
ATCGGCACCA CCGACCGCGT GCTGGCAGGG CTCTCGGTGG CCTTCGACGC CTCCTGCGAA
GAGATGTGGC TGGCCTGGCG CAACGGCGCG TGCCTGGTCC CGGCGCCCCG AGCGCTGGTG
CGAAGCGGAG TCGATCTGGG TCCGTGGCTG GTGGAGAACG GCATCACCGT CGTCTCCACA
GTTCCGACCC TCGCGTCGCT GTGGCCTGCC GAAGCGCTGA CGGACGTCAG GTTGCTGATC
TTCGGCGGTG AGGCGTGTCC GCCGGAGCTG GCTGAGCGTC TGGCCGTGAC GGGGCGCGAG
GTGTGGAACA CCTACGGCCC GACCGAGGCG ACGGTCGTGG CGAGCGCCGC GCTGCTGACC
GGTGAGAGTC CGGTCCGTAT CGGGCTGCCG TTGGACGGCT GGGAGCTAGT GGTCGTCGAC
GACTCCGAAG AGCCGGTGCC GATGGGCGGC TCGGGGCAGT TGGTGATCGG CGGCGTGGGG
TTGGCGCGGT ATCTGGATCC GGAGAAGGAC GCTGAGAAGT ACGCGCCGCT GAAGTCGATG
GACTGGGATC GGGCGTATCG CAGCGGGGAT CTGGTGCGGG CCGATGCTGA GGGTCTGGTT
TTCCTGGGTC GGGCCGATGA GCAGGTGAAG CTGGGTGGCC GCAGGATCGA GCTGGGCGAA
GTCGATGCCG CGCTCCAGGC GTTGCCGGGG GTGGCGGGCG CGGCTGCCGC GGTGAAGCGG
ACGGCTGGCG GCGCGGAGAT TCTGGTCGGC TATGTGGTTC CGGCCGAGCC GGGTTTCGAT
ACGGCGGCGG CGCGGGCGGC GTTGGGCGAG AAGTTGCCGG CGGCGTTGGT GCCGAGGATC
GCGGTGGTCG AGGAGTTGCC GGTGCGGACG TCGGGCAAGG TGGATCGCAA TGCGTTGCCG
TGGCCGTTGC CGGGGGTGGA GGAGCCGGTC GAGGCGGCGG AGTTGACGGT CGCGGAGGAT
TGGCTGGCTG AGCCGTGGGC TGCGGTGTTG GGCGAGCGTC CGGTGCGTCC GGAGGTGGAT
TTCTTCGATT CGGGTGGCAG TTCGTTGGTG GCGGCGCGGT TTGTGTCGAT TCTGCGGTCG
CGGTATCCGA CGGTGACGGT GCGGGATGTG TATGACCATC CGACGTTGGG GGAGTTGGCG
GCGCGGCTGA TGGCGTTGGC TCCGGAGGCG GTGGGTCTGG TCGCGGAGTC GGTGCCGGAT
GTGGCGCCGG TGAGCCGGGG TGCGCAGGCG GTGCAGGTGG TGGCGATGCT GCCGTTGGCG
ACGGTGGGTG CGCTGCGGTG GCTGACGTTG TTGGCGGCGT TGGGGAATCT GGTGGATGTG
CCGTGGGCGC CGCGGGTGTC GTGGTGGTGG GTGGCGGCGG GGTTCGTGGT GTTCGTCTCT
CCGCCGGGCC GGATCGCGGT GGCGGCTTCG GGGGTGCGGT TGTTGGTGCG GGGTGTGCGG
CCGGGTGAGT ATCCGCGGGG CGGGTCGGTG CATCTGCGGT TGTGGGCTGC GGAGCAGTTG
GCGTGGCGGG TGGGTGTGTT GACGACGGTG ACGGGCCCGT GGAACACGGT GTACGCGCGG
GCGTTGGGGG CGCGGCTGGG TCCGGGGGTG GATTTGCATT CGCCGCCGCC GGTGACGGGG
ATGCTGCGGA TGGACGCGGG GTCGTCGGTG GAGCCGGAGG TGGATCTGAC GGGGTTCTGG
GTGGACGGCG GCCGGGTCCG GGTGGGTGAG TTGCGTATCG GTGCGGGGGC GTCGGTGGGT
GCGCGGTCGT TGTTGTTGCC GGGGGCGCGG ATCGGTGAGC GGGCGCGGAT CGCGCCGGGT
TCGTCGGTGG GCGGTGTGGT TCCGGCTGGT CAGGAGTGGG CGGGGTCGCC GGCGGTGCGT
CTTCGGAAGG CGGAGCGGCC TCCGGGGTTG GCGCGGCGTT CGCGGGTGTG GACGCTGATT
TACGGCACGA CCGCGGTGGG GTTGGCGTTG TTCCCGTTGG TCGCGGCTAT TCCCGCGTTG
CTGATCGTGG CGGGGTTCGT GCATGACACG GCGACGGTGT GGCAGGGCTT GGGGTGGGCT
CTGGTGGGGG TGTTGCCTGC GACGCCGGTG TTCGTCGTCT GTTACGCGCT GCTGACGCTG
GTGTGTGTCC GGGCGTTGAG TGTCGGGATG GTGGCCGGCG ATCATCCGCT GCACAGCCGT
CGGGCGTGGC AGACGTGGGC GACGCTGCAG TTGATGGCGA TGGCGCGGGT GTGGCTGTAT
CCGCTGTACG CGAGCATCCT GACGCCGTCG TGGCTGCGTG TTTTGGGCAT GCGGGTGGGG
CGTGGCGTGG AGATGTCGAC GGTGTTGGCG GTTCCGGCGA TGACGACGGT GAACGACGGC
GCGTTCCTGG CCGACGACAC GATGGTCGCG CCGTATGAGA TGGCGGGCGG CTGGCTGCGG
GTGGGGCAGG CGCGGATCGG CAAGCGGGTG TTCGTGGGGA ACTCCGGGAT GGTGGCGCCG
GGCCGCAAGC TGCCGAAGGA GAGTCTGGTC GGGGTGTTGT CGGCGGCTCC GCACAAGGCG
AAGCGGGGCA AGTCGTATCT GGGGATGCCG CCGGAGCGGC TGCGCCGTCC TGGTCAGGAT
GTCGATGACG CGTTGACGTA CAACCCGCCG CGGCGGTTGA AGGCAGCGCG CGCCGCGATC
GAGGCGGCGC GGGTGGTGCC GATGATGGTG ACGGCGGCGG TGGGGTTGTC GGCGGTGGCG
GTGGTGACGC AGGTGGCGCG CAGTTGGGGC GTGGCTGCGG GGGTGTTGTT GGGCGGTGTC
GTGTTTTTGG CCGCAGGAGT CGTGGCGGGC GCGGTGGCGG TGGTGGCGAA GTGGGTTTTG
GTGGGGCGGA TCGGGGTGTC GGATCAGCCG CTGTGGAGTT CGTTCGTGTG GCGCAACGAG
TTGGCGGACA ACTTCGTGGA GTTGGTGGCG GCGCCGTGGT TCGCCGAGAC GTGGTTGGGC
ACTGCTGCGT TGAACGTGTG GCATCGGGCA ATGGGGTCGC GGGTGGGCCG GGGTGTGTGG
TGTGAGACGT ATTGGTTGCC GGAGGCGGAT CTGATCGTGT TGGGGGATGC CTCGACGGTG
AACCGGGGGT GTGTGGTGCA GACCCATCTG TTTCATGATC GGGTGATGAG TATGGATGTG
GTGCGGGTGG AGGCGGGTGC GACGTTGGGT CCGCAGGGTG TGATTCTGCC GGCGGCGCAG
ATCGGGGCGC AGGCGACGGT GGGTCCGGCG TCGTTGGTGA TGCGGGGTGA GTCGGTGCCG
GCGCATACGC GGTGGCAGGG CAATCCGATC GCGCCGTGGC CGGAGCAGGC GTGA
|
|---|
| Protein sequence | MDQPVSGLDA LAVYDASALA PAPRTLIDIL HATARAHPDA TALDDGRRAL DYSALLVEAS
AMAARLGRAG VGAGDRVGVR VPSGTVDLYI AILGVLTAGA AYVPVDADDP DERAQLVFGE
AGVRAVIGEG LRIAAEPAEP AEPAEPAEPA EPAEPAEPAE PAEPAEPVQP VQPAERTQPV
EQAEHAAAAP ASRRPPTLTD DAWIIFTSGS TGKPKGVAVS HRNAAAFVDA EAGLFLRQAP
IGTTDRVLAG LSVAFDASCE EMWLAWRNGA CLVPAPRALV RSGVDLGPWL VENGITVVST
VPTLASLWPA EALTDVRLLI FGGEACPPEL AERLAVTGRE VWNTYGPTEA TVVASAALLT
GESPVRIGLP LDGWELVVVD DSEEPVPMGG SGQLVIGGVG LARYLDPEKD AEKYAPLKSM
DWDRAYRSGD LVRADAEGLV FLGRADEQVK LGGRRIELGE VDAALQALPG VAGAAAAVKR
TAGGAEILVG YVVPAEPGFD TAAARAALGE KLPAALVPRI AVVEELPVRT SGKVDRNALP
WPLPGVEEPV EAAELTVAED WLAEPWAAVL GERPVRPEVD FFDSGGSSLV AARFVSILRS
RYPTVTVRDV YDHPTLGELA ARLMALAPEA VGLVAESVPD VAPVSRGAQA VQVVAMLPLA
TVGALRWLTL LAALGNLVDV PWAPRVSWWW VAAGFVVFVS PPGRIAVAAS GVRLLVRGVR
PGEYPRGGSV HLRLWAAEQL AWRVGVLTTV TGPWNTVYAR ALGARLGPGV DLHSPPPVTG
MLRMDAGSSV EPEVDLTGFW VDGGRVRVGE LRIGAGASVG ARSLLLPGAR IGERARIAPG
SSVGGVVPAG QEWAGSPAVR LRKAERPPGL ARRSRVWTLI YGTTAVGLAL FPLVAAIPAL
LIVAGFVHDT ATVWQGLGWA LVGVLPATPV FVVCYALLTL VCVRALSVGM VAGDHPLHSR
RAWQTWATLQ LMAMARVWLY PLYASILTPS WLRVLGMRVG RGVEMSTVLA VPAMTTVNDG
AFLADDTMVA PYEMAGGWLR VGQARIGKRV FVGNSGMVAP GRKLPKESLV GVLSAAPHKA
KRGKSYLGMP PERLRRPGQD VDDALTYNPP RRLKAARAAI EAARVVPMMV TAAVGLSAVA
VVTQVARSWG VAAGVLLGGV VFLAAGVVAG AVAVVAKWVL VGRIGVSDQP LWSSFVWRNE
LADNFVELVA APWFAETWLG TAALNVWHRA MGSRVGRGVW CETYWLPEAD LIVLGDASTV
NRGCVVQTHL FHDRVMSMDV VRVEAGATLG PQGVILPAAQ IGAQATVGPA SLVMRGESVP
AHTRWQGNPI APWPEQA
|
|---|
| |