Gene Caci_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4600 
Symbol 
ID8335954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5231668 
End bp5232414 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID644957701 
Productputative transcriptional regulator, ArsR family 
Protein accessionYP_003115303 
Protein GI256393739 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.964571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00711376 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCGA CGCGTCCGGT GGCCGCCGAG ATCCCGCTCT ATGCGGGCAC CGACCTGGCC 
TCGATCGCCC GCCTGTTCGC CGACACCACC CGCGCGACCT TCTGCCTGGC CCTCCTCGAC
AACCGCGCCT GGACCCCCAC TGAACTAGCC CGCCACGCCG GCGTGGCCCT GTCGACAGCC
ACCGAGCACC TGAACGCCCT GGTCGCCGGC GGCCTCCTCA CCGAAGAGCG CCAAGGCCGC
CACCGCTACG TCCACCTAGC AAACCCGCAC ATCGCCGACC TCATCGAAAC CCTCGCCGCA
GCCGCCCCCC TCCACCCCTC CCCCGCCCCC CGCACCCTCT CCGCCGACAC CCGCCGCCGA
GCCCTAGCCC ACGCCCGCAC CTGCTATGAC CACCTAGCCG GCACCCTCGG CGTAGCCATC
ACGAACGCCA TGACCGACCA CGCACTCATA GACTGGCAAC AAGGCCTCCG CCTGACTCCG
ACAGGCGAGA AATGGCTCTC CGACCAGGGC ATCAAGGTCG CAGCCACAGG CAGACGCCCA
GCCCTCCGCC CCTGCCTCGA CTGGACCGAA CGCCGCCCCC ACCTGGCCGG CACCATCCCC
GCAGCACTCT GCGACCACGC CCTAGCCCAC GGCTGGATCA AGCGCATCGG CAGCACGCGC
GCGGTGATCG TCACCCCGGC CGGACGCGAT GTGCTCGGCG AGCGACTGGG GTTGTCAGCG
GAGATCTTGA CGCCGGCCGC GAGCTGA
 
Protein sequence
MNATRPVAAE IPLYAGTDLA SIARLFADTT RATFCLALLD NRAWTPTELA RHAGVALSTA 
TEHLNALVAG GLLTEERQGR HRYVHLANPH IADLIETLAA AAPLHPSPAP RTLSADTRRR
ALAHARTCYD HLAGTLGVAI TNAMTDHALI DWQQGLRLTP TGEKWLSDQG IKVAATGRRP
ALRPCLDWTE RRPHLAGTIP AALCDHALAH GWIKRIGSTR AVIVTPAGRD VLGERLGLSA
EILTPAAS