Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4600 |
Symbol | |
ID | 8335954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5231668 |
End bp | 5232414 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957701 |
Product | putative transcriptional regulator, ArsR family |
Protein accession | YP_003115303 |
Protein GI | 256393739 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.964571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00711376 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACGCGA CGCGTCCGGT GGCCGCCGAG ATCCCGCTCT ATGCGGGCAC CGACCTGGCC TCGATCGCCC GCCTGTTCGC CGACACCACC CGCGCGACCT TCTGCCTGGC CCTCCTCGAC AACCGCGCCT GGACCCCCAC TGAACTAGCC CGCCACGCCG GCGTGGCCCT GTCGACAGCC ACCGAGCACC TGAACGCCCT GGTCGCCGGC GGCCTCCTCA CCGAAGAGCG CCAAGGCCGC CACCGCTACG TCCACCTAGC AAACCCGCAC ATCGCCGACC TCATCGAAAC CCTCGCCGCA GCCGCCCCCC TCCACCCCTC CCCCGCCCCC CGCACCCTCT CCGCCGACAC CCGCCGCCGA GCCCTAGCCC ACGCCCGCAC CTGCTATGAC CACCTAGCCG GCACCCTCGG CGTAGCCATC ACGAACGCCA TGACCGACCA CGCACTCATA GACTGGCAAC AAGGCCTCCG CCTGACTCCG ACAGGCGAGA AATGGCTCTC CGACCAGGGC ATCAAGGTCG CAGCCACAGG CAGACGCCCA GCCCTCCGCC CCTGCCTCGA CTGGACCGAA CGCCGCCCCC ACCTGGCCGG CACCATCCCC GCAGCACTCT GCGACCACGC CCTAGCCCAC GGCTGGATCA AGCGCATCGG CAGCACGCGC GCGGTGATCG TCACCCCGGC CGGACGCGAT GTGCTCGGCG AGCGACTGGG GTTGTCAGCG GAGATCTTGA CGCCGGCCGC GAGCTGA
|
Protein sequence | MNATRPVAAE IPLYAGTDLA SIARLFADTT RATFCLALLD NRAWTPTELA RHAGVALSTA TEHLNALVAG GLLTEERQGR HRYVHLANPH IADLIETLAA AAPLHPSPAP RTLSADTRRR ALAHARTCYD HLAGTLGVAI TNAMTDHALI DWQQGLRLTP TGEKWLSDQG IKVAATGRRP ALRPCLDWTE RRPHLAGTIP AALCDHALAH GWIKRIGSTR AVIVTPAGRD VLGERLGLSA EILTPAAS
|
| |