Gene Caci_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4577 
Symbol 
ID8335931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5208952 
End bp5209653 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID644957678 
ProductYCII-related protein 
Protein accessionYP_003115280 
Protein GI256393716 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.229228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.416535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGA TCGTGGTGAC CGAGAGCCTG ACGCTGGACG GCGTGATGCA GGCGCCGGCC 
GGGCCGAAGC AGACCGACGG GAACCCCTTC ACCGAGCACC TGCGTAAGGT GCAGAAGTAT
GTCGTGTCGG CGACGATGGC CGAGTCGCTG CCGTGGGCGA ACTCGACGGT GGTGCGCGCG
AAGCGGGACG GCGCCGGTTC CGGTGAGGGT GCCAGTGCCA GTGCCAGTGC CGGTGGTGGC
GGCGTCCCGG CGGCGGTCGC GGCGCTTCGC GACGGCATCG AGCAGGACAT CGCGACGAGG
CCTGAGGAGA TGGCTGCCAT GACCCGCTAC CTGCTCTCCA TCTACCAGCC CGACGGGCCG
CTGCCCTCCG AGGAGCGCCT CGCCGACATC GGCCGCGAGC TGGACGCGCT GAACGCCGAG
CTGCGGGAAG CCGGCTCGTG GGTGTTCGAC GGGGGACTGC ATCCGGCGAG TACGGCGACG
GTGTTGCGAC CCGGTCCGGC TTCGGGTTCT GGTTCGGGCT CCAGTTCCGG CTCCGGCTCC
AACGAGGTGC TGATCACCGA CGGACCCTTC GCCGACAGCA AGGAACACCT CGGCGGCATC
AAGATCATCG ATGCCCCCGA CCTGGACGCG GCGCTCGGCT GGGCCGCGAA GCTGACGCGT
GCCGTCGGGC TGCCCGTCGA GGTCCGGCCG TTCCTGGGCT GA
 
Protein sequence
MGQIVVTESL TLDGVMQAPA GPKQTDGNPF TEHLRKVQKY VVSATMAESL PWANSTVVRA 
KRDGAGSGEG ASASASAGGG GVPAAVAALR DGIEQDIATR PEEMAAMTRY LLSIYQPDGP
LPSEERLADI GRELDALNAE LREAGSWVFD GGLHPASTAT VLRPGPASGS GSGSSSGSGS
NEVLITDGPF ADSKEHLGGI KIIDAPDLDA ALGWAAKLTR AVGLPVEVRP FLG