Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4577 |
Symbol | |
ID | 8335931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5208952 |
End bp | 5209653 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957678 |
Product | YCII-related protein |
Protein accession | YP_003115280 |
Protein GI | 256393716 |
COG category | [S] Function unknown |
COG ID | [COG3795] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.229228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.416535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGA TCGTGGTGAC CGAGAGCCTG ACGCTGGACG GCGTGATGCA GGCGCCGGCC GGGCCGAAGC AGACCGACGG GAACCCCTTC ACCGAGCACC TGCGTAAGGT GCAGAAGTAT GTCGTGTCGG CGACGATGGC CGAGTCGCTG CCGTGGGCGA ACTCGACGGT GGTGCGCGCG AAGCGGGACG GCGCCGGTTC CGGTGAGGGT GCCAGTGCCA GTGCCAGTGC CGGTGGTGGC GGCGTCCCGG CGGCGGTCGC GGCGCTTCGC GACGGCATCG AGCAGGACAT CGCGACGAGG CCTGAGGAGA TGGCTGCCAT GACCCGCTAC CTGCTCTCCA TCTACCAGCC CGACGGGCCG CTGCCCTCCG AGGAGCGCCT CGCCGACATC GGCCGCGAGC TGGACGCGCT GAACGCCGAG CTGCGGGAAG CCGGCTCGTG GGTGTTCGAC GGGGGACTGC ATCCGGCGAG TACGGCGACG GTGTTGCGAC CCGGTCCGGC TTCGGGTTCT GGTTCGGGCT CCAGTTCCGG CTCCGGCTCC AACGAGGTGC TGATCACCGA CGGACCCTTC GCCGACAGCA AGGAACACCT CGGCGGCATC AAGATCATCG ATGCCCCCGA CCTGGACGCG GCGCTCGGCT GGGCCGCGAA GCTGACGCGT GCCGTCGGGC TGCCCGTCGA GGTCCGGCCG TTCCTGGGCT GA
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Protein sequence | MGQIVVTESL TLDGVMQAPA GPKQTDGNPF TEHLRKVQKY VVSATMAESL PWANSTVVRA KRDGAGSGEG ASASASAGGG GVPAAVAALR DGIEQDIATR PEEMAAMTRY LLSIYQPDGP LPSEERLADI GRELDALNAE LREAGSWVFD GGLHPASTAT VLRPGPASGS GSGSSSGSGS NEVLITDGPF ADSKEHLGGI KIIDAPDLDA ALGWAAKLTR AVGLPVEVRP FLG
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