| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4559 |
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| Symbol | |
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| ID | 8335913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5187926 |
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| End bp | 5188504 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644957660 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003115262 |
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| Protein GI | 256393698 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.685616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCT GGGAGCCGAG TGCCGAAGAC CGCCTGCGCG AGGCCGCGCT CGCGCTGTTC
CTGGACCGCG GCTATGAGAA CGTCACCGTC AGCGACATCA CCGACCACGC CGGGCTGACC
CGCCGCACGT TCTCCCGCTA CTTCGCCGAC AAGCGCGACG TGCTGTTCGC CGGCTCAGAC
CGGCTGCCGG CGGTCATCTC CAAAGCGGTG CGCGACGCCG ACCCCGCGCT CGGTCCGGCC
GAGGCGCTCC TGGCCGGACT CGCCGACACC GGCACGATCC TGGCCCGGAA CGTCCCCCGC
TCCCCCGAGC GCCGCCGCGT CGTCGCCGGC AGCGCCGAAC TCCAGGAGCG CGAGCGCACC
AAGCTCGCCG CCGTCACCGA CTCCCTGACC GAAGCGCTTC AGGAACGCGG CGCGTCCGGC
ACCGCCGCGC GGCTGCTCGC CGACGTCGGC ATCGCGGTGT TCCGGACCGC GTTCGCCGGC
TGGACCGAGG AGCCGGACGG CGCGGACTTC CCGGTCTACG TGCACGAAGC CGCGGCCGAA
CTCACCAGCG CCCTGGCACC GATCGCGCAG CGGGACTGA
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| Protein sequence | MPRWEPSAED RLREAALALF LDRGYENVTV SDITDHAGLT RRTFSRYFAD KRDVLFAGSD
RLPAVISKAV RDADPALGPA EALLAGLADT GTILARNVPR SPERRRVVAG SAELQERERT
KLAAVTDSLT EALQERGASG TAARLLADVG IAVFRTAFAG WTEEPDGADF PVYVHEAAAE
LTSALAPIAQ RD
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