Gene Caci_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4546 
Symbol 
ID8335900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5173700 
End bp5174758 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID644957648 
ProductO-methyltransferase family 2 
Protein accessionYP_003115250 
Protein GI256393686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CGAACCCTCC TTCCCCGCAG TTCTCTCCCG CGCCTTCCTC CCCCCAGTCC 
GCGATGCGAC TACGCGAACT GATTTTCGGC GCGGCATGCG CTGCGGCCGT CCGCGCGGCG
GCGTCCCTCG AAGTCGCCGA CGCCCTCGGC GAGGAACCGA TGACCGTCGA GGACCTGGCC
AAGGCAGTCC ACGCCGAACC AGGACCCCTG CGCCGCCTCC TCCGGACACT GACCTGCTAC
GGAGTCTTCA CCGACGCCGG CGAGGACCGC TACGCGCACA CCGACATGTC CTGGCAGCTC
CGCAAGGAGT CCCCGAACAG CCTCCACTAC ATCGCCCTGT GGTGCACGGA GCCCTGGACC
TGGCAACTCT GGCCGCACCT CGACGAGGCA GTCCGCACCG GCCGCAACAT CTTCCCCGAC
GTCTACGGCA AGGAGTTCTT CACCTACCTC CACGAAGACG CCACCGCATC AGCCGAAGTC
TTCGACAAGG CGATGACCCA CTCCAGCCGG CAATCAGCAG CCGACCTCGT GGGCTTCCTG
AACCTCGAAG GCATCACCAG CGTCGTCGAC ATCGGCGGCG GCCAAGGCCA CGTCCTGGCC
AGCCTCCTGG AGAAGCACCC CGAAATCCAC GGCACCCTCA TCGACCTCCC CCAGGTCATA
GCCCGCGCCG ACCCCCGCCT CCACGAAGCA GGCACCCTGT CCCCCCGAGC CCGCCTCATA
GCAACAGACT GCCGCACCGA AGTCCCCGTC CAAGCAGACC TCTACATCAT CAAAAACATC
CTCGAATGGG ACACCGACAG CACCCGCAGA ACCCTCCGCA ACGTCGTCGA AGCAGCCCCA
CCCGGAGCCC GCGTCGTCGT CGTGGAAAAC CTCGTCGACG ACACCCCCTC CATGCGCTTC
ACCACCGCAA TGGACCTCCT CCTCCTCCTC AACGTCGGCG GCGCCAAGCA CTCCCGCGCC
AGCCTGCAGA CCCTGCTCAC CGAGGCGGGC CTGCGCGTCG ACGAGGTGCG ACCGGTGAAC
CCGTATCTGC ACGCGTTCGA ATGCGTGGTC CCGGGCTGA
 
Protein sequence
MTIANPPSPQ FSPAPSSPQS AMRLRELIFG AACAAAVRAA ASLEVADALG EEPMTVEDLA 
KAVHAEPGPL RRLLRTLTCY GVFTDAGEDR YAHTDMSWQL RKESPNSLHY IALWCTEPWT
WQLWPHLDEA VRTGRNIFPD VYGKEFFTYL HEDATASAEV FDKAMTHSSR QSAADLVGFL
NLEGITSVVD IGGGQGHVLA SLLEKHPEIH GTLIDLPQVI ARADPRLHEA GTLSPRARLI
ATDCRTEVPV QADLYIIKNI LEWDTDSTRR TLRNVVEAAP PGARVVVVEN LVDDTPSMRF
TTAMDLLLLL NVGGAKHSRA SLQTLLTEAG LRVDEVRPVN PYLHAFECVV PG