Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4544 |
Symbol | |
ID | 8335898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5172288 |
End bp | 5172935 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957646 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003115248 |
Protein GI | 256393684 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.796901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAA CGCAGATGGC GATGATCAGT ATCAGTCAGG CCGCCGACGC GGCGGAGCCT CAGGATGAGG CAACACCCGG AAGCGCTTCG GCGCCGGCCG CCCGCGCCTC GATGCAGGCT CTGTCCGCGG CACTACGCCG TGAGCGTCGG CGCGCCGACC TGAGCCTGAG CGAGGTGGCC CGACGCGCCG ACTTGTCGAA GTCCACGCTG TCCCAGCTGG AGTCCGGGAT CGGGAATCCG AGCCTGGAGA CACTGTGGGC ACTGTGCACG GCCCTGGGCA TCCCTTTCGG CCAGCTCTTC GACCCCCCAC CGCCGCGTAC CCAGGTGATC CGTGCCGGGT CGGGCGCGGC GGTGGCCGCC GAGCAAGCCG ACTATCGCGT ACTGCTACTG GCCACCTGCC CGCCGGGCGC GCGCCGGGAC GTCTATCGTG TGGAGGCCGA GCCCGGATCG GTGCGCAGGT CCGATCCGCA CGCGCCCGGC GTCGTGGAAC ACGTGGTGGT GTGCGCGGGG CGCGCGTTGG TAGGGGTGGC CGAGGAGCCG GTGGAGCTGG GCCCGGGCGA CTACATCGTC TATCCCGGCG ACGTCCCGCA CCTGTTCGAG GCATTGGAGC CCGGCACATG GGCGGTCACG GTGTCGGAGC ACGTGTGA
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Protein sequence | MNRTQMAMIS ISQAADAAEP QDEATPGSAS APAARASMQA LSAALRRERR RADLSLSEVA RRADLSKSTL SQLESGIGNP SLETLWALCT ALGIPFGQLF DPPPPRTQVI RAGSGAAVAA EQADYRVLLL ATCPPGARRD VYRVEAEPGS VRRSDPHAPG VVEHVVVCAG RALVGVAEEP VELGPGDYIV YPGDVPHLFE ALEPGTWAVT VSEHV
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