Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4543 |
Symbol | |
ID | 8335897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5171553 |
End bp | 5172236 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957645 |
Product | AzlC family protein |
Protein accession | YP_003115247 |
Protein GI | 256393683 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.876046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.629194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGA TGTGGAGAAC GATGGACCGC GACCTGCTCC GCGGCATCGC CGTGATGTGC GCGTCGGTCG GCTTGATCGG CGTCTCCTAC GGCGCGACCG CGGTCGCGGC GGGCCTTCCG ATCTGGCTGC CGGTCCTCAC CGGCTTCCTG GTCCTCGCGG CGTCGTCGGA GTTGCTGTTC GTCGGGGTCA TCGCCGCCGG AGGCGATCCC TTCGCCGGCG CGCTGGCCGG ACTCCTGGTC AACGCGCGCC ACATCCCGTA CGGGCTCGCG GTGCCGGACG TCATCGAGAG CGGCTGGCGC CGGATCCCCA GCACCCACCT GTTGAACGAC GAAACCGTGG TGTTGGCGCT GTCCCAGGAC GACCTTCCCC GCAAACGCGC CGCCTACTGG CTGTGCGGTC TGGGAATCGT CGCCGTCTGG CCGCTGTGCG CGCTGGCCGG CGGCCTTCTC GGCGCCCTGG TCCACAACAC CGACGCGCTG GGCCTGGACG CGATGTTCCC AGCCGTCATC CTCGCGCTGA TCCTGCCCGC ACTCCGCGAC CGGCACACGC TACGGGCCGC ACTCGTCGGC GGAGCGGTAG CCATGGCCGC CTTCGCCTTC CTGCCAGTGG GTTTGCCGGA GTTGCTGGCG CTGGTCGGGG TGCCGTTCGC CGGAGGCCTC AGGCATGAGA GGTCCGTCGC GTGA
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Protein sequence | MRSMWRTMDR DLLRGIAVMC ASVGLIGVSY GATAVAAGLP IWLPVLTGFL VLAASSELLF VGVIAAGGDP FAGALAGLLV NARHIPYGLA VPDVIESGWR RIPSTHLLND ETVVLALSQD DLPRKRAAYW LCGLGIVAVW PLCALAGGLL GALVHNTDAL GLDAMFPAVI LALILPALRD RHTLRAALVG GAVAMAAFAF LPVGLPELLA LVGVPFAGGL RHERSVA
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