Gene Caci_4535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4535 
Symbol 
ID8335889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5164245 
End bp5164784 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID644957637 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003115239 
Protein GI256393675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.739296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.620598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA TCGTGCTGCT GAGCAGCGAC CACAGAAGGA TCAGGCTCTT GTTCGGCGAC 
TACCGGGGTG CGACCACGGA CCGCCAGCGC CGCAAGACCG CGGACACCCT GGTTCGAGAA
CTGTCCAAGC ACACGAGCGC CGAAGAGCGG ATCTTCTATC CCTTCGCGGC ACAAGCGCTG
GGCCAGGACG CGACCGCACG CCCGCACCGG ATCTGCTCGG CGATCAAGCG CCACCTGACA
GTGCTGGACG GTCATCGAAG GGCCGCGCAG GACGACGCCA TGTCCATGGC GCAACTCGAG
CAGGACATCG CCGAACACAT CGAGGAGGAC GAGCAGAAGT TGATGCCCCG CCTGCGCAGC
GCGTGCGAGC CCGACGTCCT GCGGCAGCTG GGGTCCAAAC TGGAGCGGGT CGAACGCGGC
GCTCCGACGC GGCCGCATCC CCACAAGCCG GACCAGGCGC CGAACCCGCT GCTCAGGACG
CCTTTCGTGA CGTGGTACGA CCGTATTCGG GACCGCGTCC GAGGGCGGGC GGGCAGTTGA
 
Protein sequence
MDAIVLLSSD HRRIRLLFGD YRGATTDRQR RKTADTLVRE LSKHTSAEER IFYPFAAQAL 
GQDATARPHR ICSAIKRHLT VLDGHRRAAQ DDAMSMAQLE QDIAEHIEED EQKLMPRLRS
ACEPDVLRQL GSKLERVERG APTRPHPHKP DQAPNPLLRT PFVTWYDRIR DRVRGRAGS