Gene Caci_4534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4534 
Symbol 
ID8335888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5163661 
End bp5164206 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID644957636 
Productprotein of unknown function DUF1130 
Protein accessionYP_003115238 
Protein GI256393674 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.360408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.813049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC GCATCTACAC GCTGGGCCAC TCGACGCGTG ACTTCGCTGA GCTGCTGGAG 
ATGCTCCGGG CCAACGGAGT CACCCGCCTG GTCGACGTCC GCAGGTTTCC CTCCTCCCGT
AAGCATCCGC AGTTCAACGC CCCCGCGATC GCCGAGGCTC TGCCGCCGGA CATCGGCTAC
GGCCAGATTC CGAAACTGGG CGGCCGGCGG TACACCCCCC GAGGCGTGCC GAGCCCGAAC
GGCGCCTGGC TGGTCAAAGC CTTCCGCGAC TACGCCGATT ACATGGCGAC GGACGACTTC
CGGGACGGTC TCGACGAACT CCTGCGGCTG GCTGCGCACG AGACCCCGGC GATCATGTGC
AGCGAGGCCG TGCCCTGGCG CTGCCATCGC CGGCTGATCA CCGACGCGCT GATCGTCGCC
GGCGCGGAGG TGCGGCACAT CATGTCACCG ACGAGCACCA AGCCGGCGGT CCTGGACCAG
CAGGCGCGGG TCGAGGACGG CCGACTGACT TATCCTCCGC CGGCGGACGC GGCTTGCCCG
GCCTGA
 
Protein sequence
MTNRIYTLGH STRDFAELLE MLRANGVTRL VDVRRFPSSR KHPQFNAPAI AEALPPDIGY 
GQIPKLGGRR YTPRGVPSPN GAWLVKAFRD YADYMATDDF RDGLDELLRL AAHETPAIMC
SEAVPWRCHR RLITDALIVA GAEVRHIMSP TSTKPAVLDQ QARVEDGRLT YPPPADAACP
A