Gene Caci_4526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4526 
Symbol 
ID8335880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5155937 
End bp5156401 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content73% 
IMG OID644957628 
Productprotein of unknown function DUF779 
Protein accessionYP_003115230 
Protein GI256393666 
COG category[S] Function unknown 
COG ID[COG3564] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.163674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGG AGGCGCGCGG CGCGGGCGGC GTCGGCACCG AGACCGGGAC TGGGACTGGG 
ACCGGGACTG GCACCGGCAC CGGCACCGAG CCGCCGTCAC GGATCGCGGT GACCGAAGCC
GCGGCCGAGG TGATGCGCAA GCTCTACGCC ACGCACGGAC CGCTGATGTT CCACCAGTCC
GGCGGCTGCT GCGACGGCAG CTCGCCGATG TGCTACCTGG AGGGCGAGTT CCGCACCGGG
GCGTCGGACG TGCTGATGGC GCGGCTGGCC GTCGAGGGCA TCACGGAGCC GGTGACGTTC
TGGATGGGCG GTGAGCAGTT CGAGCGCTGG CGGCACACGC ACCTGACGGT CGACGTCGTG
CCGGGGCGCG GCGCCGGGTT CTCGCTGGAG GCGCCGGAGG GGGTCAGGTT CCTGATCCGC
TCGCGGCTGC TGACGGACCA CGAGGACGCG GTGCTGAACC GGTAG
 
Protein sequence
MAEEARGAGG VGTETGTGTG TGTGTGTGTE PPSRIAVTEA AAEVMRKLYA THGPLMFHQS 
GGCCDGSSPM CYLEGEFRTG ASDVLMARLA VEGITEPVTF WMGGEQFERW RHTHLTVDVV
PGRGAGFSLE APEGVRFLIR SRLLTDHEDA VLNR