| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4522 |
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| Symbol | |
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| ID | 8335876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5149792 |
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| End bp | 5150925 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957624 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003115226 |
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| Protein GI | 256393662 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00033475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.259189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGG CCCGCGGCAT CACCCGCACC TACCAGACCC ACGGCGCCTT CACCGGCGCC
CGGACCGTGC CGGCGCTGCG CGGTGTGGAC TTCACGCTGC CCGACGGCGG CGCGGTGTCC
TTCATCGGCG AGTCCGGCTG CGGCAAGACC ACGCTGGGGA AGATCCTCAC CGGACTGGAG
ACCTTCGACG GCGGCGAGCT GATCGTGGAC GGCGTCGCGC TGTCCGGGCT CAAGCCGCGG
CAGCGGGAGA AGTACTTCCG CAGGATCCAG ATGATCCATC AGGACCCTTA TTCGGCGCTG
AACCCGACCC GCACGGTCGA GGCGACGTTG CGCGATCCGC TGCGGATGCG CGCGAAGGAG
AGGGGCGCGA GCGGCGGCGG GGGCGGCGAC GGCGAGGGCG AGGGCGGCTG GCGCGCGCGT
GCCGCCGAGC TGCTGACGCT GGTCGGCCTC GAGCCGGCCG CCGTCCTGCC GAAGTACCCG
CACCAGCTCT CCGGCGGGCA GCGGCAGCGC GTGGTCATCG CCCGGGCGCT GACCGTCGAC
CCGGAGGTGC TGATCGCCGA CGAGGCGGTG TCGATGATCG ACGTCTCGAT GCGGCTGGGC
ATCCTGAAGC TGCTGCGCGA TCTGCGCAGC CGGCTGGGGA TCTCGCTGGT GTTCATCACG
CACGACGTCG CCACCGCGCG CTACGTCGGC GAGGGCGGCG AGCTGCACGT GATCTACCGC
GGCGAGGTGG TCGAGCGCGG GCTCACCGAC GAGGTGATCC TGGCGCCGGT GCACCCCTAC
ACGCAGTGCC TGCTCTCGGC GGTGCCGATC ATGCGCGGGC TGGAGGAGCC GGGCCCGGAC
CGGACGGCGC CGACGACGGC GCTGGACGAG CGGACGCCGA CGCCGGGGTG CTTGTTCGAG
CCGCGGTGCC CGTTCGCGCA GGATCAGTGT GCTGAGAAGC ATCCGGTGCT GGTGCCTTTC
GGGCTAGACG CGGTGGGGGA GTCGGGCGCT GTGGGGGAGT CGAACGCCGC CGCCGCTGGT
CCCGCCACCG ATACCGGCTC CGAGAACGGC TCCGAATCCG GACACGTCCA CGCCTGCTTC
TACCCGGAGT CCCGGCGGGT GGTCGGCGTC GAGGTGGGAG CCGGCAGCGC GTGA
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| Protein sequence | MIQARGITRT YQTHGAFTGA RTVPALRGVD FTLPDGGAVS FIGESGCGKT TLGKILTGLE
TFDGGELIVD GVALSGLKPR QREKYFRRIQ MIHQDPYSAL NPTRTVEATL RDPLRMRAKE
RGASGGGGGD GEGEGGWRAR AAELLTLVGL EPAAVLPKYP HQLSGGQRQR VVIARALTVD
PEVLIADEAV SMIDVSMRLG ILKLLRDLRS RLGISLVFIT HDVATARYVG EGGELHVIYR
GEVVERGLTD EVILAPVHPY TQCLLSAVPI MRGLEEPGPD RTAPTTALDE RTPTPGCLFE
PRCPFAQDQC AEKHPVLVPF GLDAVGESGA VGESNAAAAG PATDTGSENG SESGHVHACF
YPESRRVVGV EVGAGSA
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