Gene Caci_4521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4521 
Symbol 
ID8335875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp5148779 
End bp5149795 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID644957623 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003115225 
Protein GI256393661 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00657283 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.473446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG TACAAGTACG CGGCCTGACG GTCGAGTACC AGACGACCGC CGGCTGGCTG 
CCCGCGGTGG CCGACGCCGG GCTGGACCTG CGCGCCGGGG AGATCACCGG CCTGGTCGGG 
GAGTCCGGCT CCGGTAAATC CACGCTCGCG CTGGCGCTGC TGAACGCGGT GCCGGCGCCC 
GGGCGGATCG CCGCCGGGAG CGTGGAGGTC GCCGGGGTCG GGGACGTCAC CAAGCTGGGC 
GGCAAGCAGC TGCGCAAGGC CCGCGGCGGC GCGATCGGCT ACGTGTTCCA GGCCTCGCAG 
AACTCGCTGA ACCCGCTGAC GACCATCGGC CGGCAGCTGC TGGACCTGGG ACGCTCGCAC 
GAGGTCGCCG ACCTGCGTGC TCTGATAGCC CGGGCCAGGG ACCTGGCGGA CCGGATGGGC 
CTGGACGGCC AGCGGGTGCT GGACTCCTAC CAGCACGAGC TCTCCGGCGG GATGCGCCAG 
CGCATCGGCA TCGTCTTCGC GCTGGTCCTG AACGCCAAGG TGCTGATCCT GGACGAGCCG 
ACCACCGCGC TGGACATGCT CTCCCAGGCC TCGGTGCTGG AGATCGTGCG CAAGGTGCAC 
GACGAGAACC AGCTCAGCAC CCTGATCATC ACGCACGACA TCGGCGCGAT CTCCGAGATC 
GCCGACCGGC TGGCGGTGAT GTACGGCGGG CGGATCGTCG AGGACGGCCC GCTGCTGGAC 
GTCCTGCGCC GGCCCACGCA CCCCTATACC AAGGCCCTGA TAGGCGCCAC GGCGCGCATC 
ACCGGCGACG TGGAGGCGGC GCGGGCGCTG CCCGGGCGGC CGCCGGACCT GACCACCGTG 
GCGCGCGCCG GCTGCGTCTT CCGCGACCGC TGCCCGTTCG CGGTCGCGGT CTGCGCCGAG 
GTCGAGCCGG AGCTCGCGAC CTGGGAGTCC GGGCGCCGCC GCGCGTGCCA CGTCGAACCG 
TCCACCGTGC TCTCCGGGAC CGCCGGGGCG CCCGCCGCCG TGGGAGAACC GGCATGA
 
Protein sequence
MSEVQVRGLT VEYQTTAGWL PAVADAGLDL RAGEITGLVG ESGSGKSTLA LALLNAVPAP 
GRIAAGSVEV AGVGDVTKLG GKQLRKARGG AIGYVFQASQ NSLNPLTTIG RQLLDLGRSH 
EVADLRALIA RARDLADRMG LDGQRVLDSY QHELSGGMRQ RIGIVFALVL NAKVLILDEP 
TTALDMLSQA SVLEIVRKVH DENQLSTLII THDIGAISEI ADRLAVMYGG RIVEDGPLLD 
VLRRPTHPYT KALIGATARI TGDVEAARAL PGRPPDLTTV ARAGCVFRDR CPFAVAVCAE 
VEPELATWES GRRRACHVEP STVLSGTAGA PAAVGEPA