| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4511 |
|---|
| Symbol | |
|---|
| ID | 8335865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5137128 |
|---|
| End bp | 5137694 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957613 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003115215 |
|---|
| Protein GI | 256393651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03086] conserved hypothetical protein TIGR03086 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0916947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA TTCACAAGCA GTTGACCGAA GCAGCAGACC AGGCCGCGAC CATCGTGGCG
AACACCGATT CCAGCCAGTT CGGCGACAAG ACCCCCTGCA CCCAGTGGGA CGTCAAGGAG
CTGCTGAACC ACCTGATCCT GTGGACGGGC TACTCCTTCG AGCGCCGCGC CCGCAGCGAG
CAGGTCGGAC CCGACCTCAC GGAGCGCGAC TTCGCCGCCG AGCCCGACTA CGCGGCCGCC
TACCGCGCGC AGCTCGACCG CGCCCTGGCC GCCTGGGCTC CCGCCGAGGT CTGGGACAGC
GAGATCGACA CCGGCGGCGG CAAGACCCCC GCCCCCCAGA TCGCCGAGAT GGTCCTGATG
GAGATGGTCC TGCACGGCTG GGACCTCGCC ACCGCCACCG GCCAGCCCTA CCAGACCTCC
GACGAGATCG CCGCGACCGT CGCCAAGGCC GTCGCCGCCT CCGCCGAGAT GTACCGCCAG
TACGACGGCT TCGCCGCCGA GGTGAAGGTC GGCGCGGACG CGACGCCGCT GGACAAGGCG
CTGGCGGAGT CGGGCCGGAA GGCTTAG
|
|---|
| Protein sequence | MSTIHKQLTE AADQAATIVA NTDSSQFGDK TPCTQWDVKE LLNHLILWTG YSFERRARSE
QVGPDLTERD FAAEPDYAAA YRAQLDRALA AWAPAEVWDS EIDTGGGKTP APQIAEMVLM
EMVLHGWDLA TATGQPYQTS DEIAATVAKA VAASAEMYRQ YDGFAAEVKV GADATPLDKA
LAESGRKA
|
|---|
| |