Gene Caci_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4506 
Symbol 
ID8335860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp5132310 
End bp5132918 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID644957608 
ProductGPR1/FUN34/yaaH family protein 
Protein accessionYP_003115210 
Protein GI256393646 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.733694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGA CCTCCAACAC CGTCACCCCC GCCCCGTCCT CGTCGGGCAT CATCGCCGAT 
CCGGCTCCGC TGGGCCTGGC CGGCTTCGCC ATGACCACTT TCATTCTCAG CGTCATCAAC 
ACCAACATCA TCTCCGAGAA GGGGGGCGGG GACGTCGTCC TCGGCCTGGC CCTGTTCTAC 
GGAGGTATCG CGCAGTTGCT GGCCGGCATG TGGGAGTACC GGCGCGGCAA CACCTTCGGC 
GCCACCGCGT TCTCCTCCTT CGGCGCGTTC TGGCTCAGCT ACTGGGCCAT CGTGCACTGG 
AGCTCCGGTG AGGACGCGCA CAAGACGATC GGGCTGTACC TGTTCGCCTG GTTCATCTTC 
ACCGGCTACA TGACGGTGGC GGCGCTGCGC ACGAACGGCG CGGTACTGGC GGTGTTCGCG 
CTGCTGACGG TGACGTTCCT GCTCCTGGCC ATCGGCGCCT GGCAGAACTC CACCTCCGGG 
CCGGCCGGGT TCACCAAGAT CGGCGGCTTC GTCGGCATCG TCACGGCGCT GGCGGCCTGG 
TACGCCTCGA TGGCGGCCGT GGCCAACGAG ACGCACAAGA GGCAGATGTT CCCGACCTGG 
CCTCGATGA
 
Protein sequence
MSETSNTVTP APSSSGIIAD PAPLGLAGFA MTTFILSVIN TNIISEKGGG DVVLGLALFY 
GGIAQLLAGM WEYRRGNTFG ATAFSSFGAF WLSYWAIVHW SSGEDAHKTI GLYLFAWFIF 
TGYMTVAALR TNGAVLAVFA LLTVTFLLLA IGAWQNSTSG PAGFTKIGGF VGIVTALAAW 
YASMAAVANE THKRQMFPTW PR