| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4501 |
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| Symbol | |
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| ID | 8335855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5127749 |
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| End bp | 5128615 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957603 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_003115205 |
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| Protein GI | 256393641 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.352275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAT TGCCGGAGGT CCAGGCGCTG GCCGCGTTCC TGGACGAGCA CCTCGCCGGA
CACGCGGTCG CGGCAGCCAC GCCGGTCGCG ATCCAGGCGC TCAAGACCTA CGACCCGCCG
CTGTCGGCGC TGGAGGGCCA GGTGGTCTCC GGGGTGACGC GGCACGGGAA GTTCCTCGAC
TTCAGCGTCG GGGACGTCCA CCTGGTGCTG CACCTGGCGC GCGCCGGCTG GGTGCGCTGG
CAAGAGGAGC TGCCGACCGC GCCGCCGCGT CCGGGCAAGG GACCGCTGGC ACTGCGGGTG
CGTATGGAGG AGCCGGCGGG CAGCGGGATC GACGTGACCG AGTACGGCAC GAAGAAGGGC
CTGGCGGTCT ACGTCGTGCG CGATCCGGCT GAGGTGCCGG GCATCGCGCG CCTGGGCATC
GATCCGCTGT CGGCGGAGTT CACCGCCGAG GTGCTGGCCG GGCTGCTGGA CGGCGAGCGC
CGCCAGATCA AGGGGTTCCT GCGCGACCAG AGCGTGCTGG CGGGCATCGG CAACGCCTAC
TCCGACGAGA TCCTGCACGC CGCGCGCATG TCCCCCTACA AGCTGGCCGC CAAGCTGACG
CCGGATGAGG TCGCCGACCT GTACCAGGTG ATCATCGGCA CGCTCACCGA CGCCGTCGAG
CGCTCGCGCG GGCTGCCGAT GAAGGACCTG AAGTCGGAGA AGAAGTCGGG CTTGCGGGTG
CACGGCCGGA CCGGCGAGAA GTGCCCGGTG TGCGGCGACA CGATTCGCGA GGTGTCCTTC
GCCGACTCGG CGCTGCAGTA CTGCCCGACG TGCCAGACCG GCGGCAAGCC GCTGGCCGAC
CGGCGGATGT CGCGGTTGTT GAAGTAG
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| Protein sequence | MPELPEVQAL AAFLDEHLAG HAVAAATPVA IQALKTYDPP LSALEGQVVS GVTRHGKFLD
FSVGDVHLVL HLARAGWVRW QEELPTAPPR PGKGPLALRV RMEEPAGSGI DVTEYGTKKG
LAVYVVRDPA EVPGIARLGI DPLSAEFTAE VLAGLLDGER RQIKGFLRDQ SVLAGIGNAY
SDEILHAARM SPYKLAAKLT PDEVADLYQV IIGTLTDAVE RSRGLPMKDL KSEKKSGLRV
HGRTGEKCPV CGDTIREVSF ADSALQYCPT CQTGGKPLAD RRMSRLLK
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