Gene Caci_4498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4498 
Symbol 
ID8335852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5125247 
End bp5125918 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID644957600 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_003115202 
Protein GI256393638 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.450801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GGATCCGCGT CTGGATCATC AGCACCGACA CCCCTCCCGA GACCGCCGAG 
GGCTACGAAA GCCTGCTCGA CGACGGCGAG CGGGCCCAAG CCGCCGACTT CCTGCACGAG
CGCGACCAGC TGCGCTACCT CGTCGCCCAC GGCGCCCGCC GCCAGATCCT GGGCCGCGAA
CTGGACATCG CGCCACAGTC CCTGACCTTC ACCGCCGACA CCAACGGCAA ACCAGCCCTG
ACCGACGGCG GCCCGCACAT CAGCCTGGCC CACGACGGCG CACTGGCACT GCTGGCGGTG
GCAGCGAACC GCGAAGTCGG CGTCGACGTA CGCCAACTCG CCGAGGGCCT CGATCCCGTG
GACATGTCCG AGCGCTACTT CCTGCCCTTC GAGGCCCGCT ACGTCGCCGG CGGCCACGAC
CTCCTGGAGC AGACGGACCG CTACGCGCGC CTGTGGACCC GCAAGGAGGC GGCAGCGAAG
GTAGCCGGCG GCCTGGGCTG GGCGAACACG AAGGCAGCGG TGCTGCAACG CGACCTGGTG
GCATGCGTCG AACCGGCCAG CTCGCACCGG CACCGCGTCC TACCGGTCCC GGTACCCAGC
GGCTATCGGG CGGCGGTCGC CCTCTTCGGC GAGGCGCCGT TCCAGGTGGA GGTGGTGACC
TTCGAGGCCT GA
 
Protein sequence
MTDRIRVWII STDTPPETAE GYESLLDDGE RAQAADFLHE RDQLRYLVAH GARRQILGRE 
LDIAPQSLTF TADTNGKPAL TDGGPHISLA HDGALALLAV AANREVGVDV RQLAEGLDPV
DMSERYFLPF EARYVAGGHD LLEQTDRYAR LWTRKEAAAK VAGGLGWANT KAAVLQRDLV
ACVEPASSHR HRVLPVPVPS GYRAAVALFG EAPFQVEVVT FEA