Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4488 |
Symbol | |
ID | 8335842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5114863 |
End bp | 5115807 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957590 |
Product | PfkB domain protein |
Protein accession | YP_003115192 |
Protein GI | 256393628 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.3303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATG ACGTCATCAC GATGGGGCGC ATCGGGGTGG ACGTGTATCC GCTGCAGGTC GGGGTCGGGC TGGAGGACGT GGAGACGTTC GGGAAGTTCC TCGGCGGCAG CGCCACGAAC GTCGCCGTCG CCTCCGCGCG CCACGGACGC CGCACCGCGG TCGTCACGCG CGTCGGCGCC GATCCCTTCG GGCGCTTCGT ACGGCGCGCA CTGCGCGGGT TCGGGGTCGA CGACGCCTTC CTGGCCGAGG TCGAGGGACT GCCGACACCG GTGACCTTCT GCGAGATGTT CCCGCCGGAC GACTTCCCGA TCTACTTCTA CCGCTGGCCC AAAGCCCCCG ACCTGATGAT CGCCCCCGAC GAGCTCGACC TGGACGCGAT CGCCCGCGCG GGCGTCTTCT GGGCGACCCT CACCGGTCTG TCCGCCGAAC CCAGCCGCTC AGCCCACCAC GCCGCCTGGC AGGCCCGCGC CGCCAAGCCG CACACCATCC TCGACCTGGA CTACCGCCCG CAGTTCTGGG ACACCCGCGC CGCCGCCGGA CGCGCCGCAC GCCTGGCCCT GCCGCACGTC ACCGCAGCCG TCGGCAACCT CGACGAATGC CTCACGGCGG TCGGCGAGCG CGACCCGCAC CGCGCAGCCG ACGCCCTGCT CAGCATGGGA CCGAAGCTGG CAGTGGTGAA ACTCGGCGCC GAAGGAGTCC TGGCCCGCAC CGCCGACACA ACCCTGGAGA TCCCGGCACC CACAGTGAAA GTCCTCAACG GCCTCGGCGC CGGCGACGCA TTCGGCGGCG CCCTCTGCCA TGCACTGCTC GAAGCCTGGC CACTGAAGCG CGCACTCCAC TTCGCCAACA CCGCCGGCGC CCTGGTCGCC GCCCGCATCG AGTGCTCAAC GGCGATGCCG GACACCGCGG AGGTCTTGGC GGCACTGGAG GCCGGGGATG CGTGA
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Protein sequence | MSYDVITMGR IGVDVYPLQV GVGLEDVETF GKFLGGSATN VAVASARHGR RTAVVTRVGA DPFGRFVRRA LRGFGVDDAF LAEVEGLPTP VTFCEMFPPD DFPIYFYRWP KAPDLMIAPD ELDLDAIARA GVFWATLTGL SAEPSRSAHH AAWQARAAKP HTILDLDYRP QFWDTRAAAG RAARLALPHV TAAVGNLDEC LTAVGERDPH RAADALLSMG PKLAVVKLGA EGVLARTADT TLEIPAPTVK VLNGLGAGDA FGGALCHALL EAWPLKRALH FANTAGALVA ARIECSTAMP DTAEVLAALE AGDA
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