Gene Caci_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4488 
Symbol 
ID8335842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5114863 
End bp5115807 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content71% 
IMG OID644957590 
ProductPfkB domain protein 
Protein accessionYP_003115192 
Protein GI256393628 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.3303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG ACGTCATCAC GATGGGGCGC ATCGGGGTGG ACGTGTATCC GCTGCAGGTC 
GGGGTCGGGC TGGAGGACGT GGAGACGTTC GGGAAGTTCC TCGGCGGCAG CGCCACGAAC
GTCGCCGTCG CCTCCGCGCG CCACGGACGC CGCACCGCGG TCGTCACGCG CGTCGGCGCC
GATCCCTTCG GGCGCTTCGT ACGGCGCGCA CTGCGCGGGT TCGGGGTCGA CGACGCCTTC
CTGGCCGAGG TCGAGGGACT GCCGACACCG GTGACCTTCT GCGAGATGTT CCCGCCGGAC
GACTTCCCGA TCTACTTCTA CCGCTGGCCC AAAGCCCCCG ACCTGATGAT CGCCCCCGAC
GAGCTCGACC TGGACGCGAT CGCCCGCGCG GGCGTCTTCT GGGCGACCCT CACCGGTCTG
TCCGCCGAAC CCAGCCGCTC AGCCCACCAC GCCGCCTGGC AGGCCCGCGC CGCCAAGCCG
CACACCATCC TCGACCTGGA CTACCGCCCG CAGTTCTGGG ACACCCGCGC CGCCGCCGGA
CGCGCCGCAC GCCTGGCCCT GCCGCACGTC ACCGCAGCCG TCGGCAACCT CGACGAATGC
CTCACGGCGG TCGGCGAGCG CGACCCGCAC CGCGCAGCCG ACGCCCTGCT CAGCATGGGA
CCGAAGCTGG CAGTGGTGAA ACTCGGCGCC GAAGGAGTCC TGGCCCGCAC CGCCGACACA
ACCCTGGAGA TCCCGGCACC CACAGTGAAA GTCCTCAACG GCCTCGGCGC CGGCGACGCA
TTCGGCGGCG CCCTCTGCCA TGCACTGCTC GAAGCCTGGC CACTGAAGCG CGCACTCCAC
TTCGCCAACA CCGCCGGCGC CCTGGTCGCC GCCCGCATCG AGTGCTCAAC GGCGATGCCG
GACACCGCGG AGGTCTTGGC GGCACTGGAG GCCGGGGATG CGTGA
 
Protein sequence
MSYDVITMGR IGVDVYPLQV GVGLEDVETF GKFLGGSATN VAVASARHGR RTAVVTRVGA 
DPFGRFVRRA LRGFGVDDAF LAEVEGLPTP VTFCEMFPPD DFPIYFYRWP KAPDLMIAPD
ELDLDAIARA GVFWATLTGL SAEPSRSAHH AAWQARAAKP HTILDLDYRP QFWDTRAAAG
RAARLALPHV TAAVGNLDEC LTAVGERDPH RAADALLSMG PKLAVVKLGA EGVLARTADT
TLEIPAPTVK VLNGLGAGDA FGGALCHALL EAWPLKRALH FANTAGALVA ARIECSTAMP
DTAEVLAALE AGDA