| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4487 |
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| Symbol | |
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| ID | 8335841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5113997 |
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| End bp | 5114866 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957589 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003115191 |
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| Protein GI | 256393627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.411638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGG ACCGGATCGC CGGGGCGCCG ATCTCCTGGG GCGTGTGCGA GGTTCCCGGG
TGGGGGCATC AGCTTTCTGC CGAGCGAGTG CTGACCGAGA TGGCCGAGGC GGGGCTGCGC
GCCACCGAGT TCGGGCCGGA CGGGTTCCTG CCGGAGGATC CCGGCGAGCG GCGCGCGCTG
CTGAAGGAGT ATCAGCTTTC TGCGGTCGGC GGGTTCGTCC CGGCGGTGCT GCACGAGGCT
GGGCACGATC CGTGGCCCGG CGTGGAGGAG GCACTGGGAG GCTTCACCGC GTCGGGTGCG
GACCTGCTGG TCCTGGCGGC GGCGACCGGC GCGGACGGCT ACGACTCGCG TCCGGTGCTC
GACGCCGTGG GCTGGCGGCG GCTGTTCACG AACCTGGACC GGATCCGGGC GCGTGCCGTG
GGTCTGGGCA TCCGGACCTG TCTGCATCCG CACGTCGGCA CGATGATCGA GACCGGCGGC
GACGTGGAGC GGCTGCTCGA GGCCTCCGAC ACACCGCTGT GCCTGGACAC CGGACATCTG
CTGATCGGCG GCGGCGATCC GGCCTCGCTG GCGTCGCGCG CGGCGGACCG GATCGTGCAC
ACGCATCTGA AGGACGTGGA CGCCGCGCTC GCCGAGCGGG TGCGCGGCGG CGAGCTGACG
TACTACGACG CGGTGCGTGC CGGGATGTAC CAGCCGCTGG GGCGCGGGGA CGCCGATATC
GCAGGAGTCG TCTCCGCCCT GGAAGGGAAC GGATATCAGG GCTGGTATGT ACTGGAGCAG
GACACCGTGC TGGACGCCGA GCCGGGGCGC GGGGACGGGC CGGCCGCCGA TGTGCGCGCC
TGCGCTGCGT TCCTGGAGGG CCTGGCATGA
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| Protein sequence | MIADRIAGAP ISWGVCEVPG WGHQLSAERV LTEMAEAGLR ATEFGPDGFL PEDPGERRAL
LKEYQLSAVG GFVPAVLHEA GHDPWPGVEE ALGGFTASGA DLLVLAAATG ADGYDSRPVL
DAVGWRRLFT NLDRIRARAV GLGIRTCLHP HVGTMIETGG DVERLLEASD TPLCLDTGHL
LIGGGDPASL ASRAADRIVH THLKDVDAAL AERVRGGELT YYDAVRAGMY QPLGRGDADI
AGVVSALEGN GYQGWYVLEQ DTVLDAEPGR GDGPAADVRA CAAFLEGLA
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